RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LRRC75AQ8NAA5 344 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 MDS2Q8NDY4 140 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 MOSPD2Q8NHP6 518 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 SNIP1Q8TAD8 396 aaKnown RBP21.56■■□□□ 1.04
SNX3-203ENST00000368979 POTEKPQ9BYX7 375 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 BATF3Q9NR55 127 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 DNAJC27Q9NZQ0 273 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 PSORS1C1Q9UIG5 152 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 DKKL1Q9UK85 242 aa21.56■■□□□ 1.04
SNX3-203ENST00000368979 PINLYPA6NC86 204 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 KLK10O43240 276 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 ZIC3O60481 467 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 TFAP2AP05549 437 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 TCEA1P23193 301 aaKnown RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 SRD5A2P31213 254 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 FOXO1Q12778 655 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 SELENBP1Q13228 472 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 SYT14P1Q58G82 188 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 MEDAGQ5VYS4 303 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 DPY19L2P2Q6ZN68 376 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 NANOGNBQ7Z5D8 188 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 ZNF540Q8NDQ6 660 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 OR5M1Q8NGP8 315 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 IPCEF1Q8WWN9 437 aaPredicted RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 ARL5BQ96KC2 179 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 LRR1Q96L50 414 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 FAM173AQ9BQD7 235 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 FKBP14Q9NWM8 211 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 GPR52Q9Y2T5 361 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 SPIN1Q9Y657 262 aaPredicted RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 MPDZO75970 2070 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 PTGES3LE9PB15 166 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 FZD7O75084 574 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 SLC2A10O95528 541 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 ZNF17P17021 662 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 AQP2P41181 271 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.55■■□□□ 1.041e-7■■■■■ 32.6
SNX3-203ENST00000368979 GLYR1Q49A26 553 aaPredicted RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 BCDIN3DQ7Z5W3 292 aaKnown RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 IGFN1Q86VF2 1251 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 OR2M7Q8NG81 312 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 MFSD8Q8NHS3 518 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 SLC25A43Q8WUT9 341 aaPredicted RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 DNAJA3Q96EY1 480 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 PLEKHA8Q96JA3 519 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 UBL7Q96S82 380 aaPredicted RBP21.55■■□□□ 1.04
SNX3-203ENST00000368979 ZFP64Q9NPA5 681 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 CCNB1IP1Q9NPC3 277 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 NRIP3Q9NQ35 241 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 CMC2Q9NRP2 79 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 MED13Q9UHV7 2174 aa21.55■■□□□ 1.04
SNX3-203ENST00000368979 FREM2Q5SZK8 3169 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 CLCA1A8K7I4 914 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 KDM4EB2RXH2 506 aaPredicted RBP21.54■■□□□ 1.04
SNX3-203ENST00000368979 BLOC1S5-TXNDC5H3BN57 136 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 HIST1H2ABP04908 130 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 PEPDP12955 493 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 CCL11P51671 97 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 RPL18Q07020 188 aaKnown RBP21.54■■□□□ 1.04
SNX3-203ENST00000368979 SGCBQ16585 318 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 DEFB109BQ30KR1 87 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 ARHGAP11AQ6P4F7 1023 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 HIST3H2AQ7L7L0 130 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 FDCSPQ8NFU4 85 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 OR5J2Q8NH18 312 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 HAS2Q92819 552 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 GGHQ92820 318 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 HIST1H2ACQ93077 130 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 SLC25A36Q96CQ1 311 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 ZNF582Q96NG8 517 aaPredicted RBP21.54■■□□□ 1.04
SNX3-203ENST00000368979 SIGLEC11Q96RL6 698 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 HES7Q9BYE0 225 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 FN3KQ9H479 309 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 AMBNQ9NP70 447 aa21.54■■□□□ 1.04
SNX3-203ENST00000368979 BOKQ9UMX3 212 aaPredicted RBP21.54■■□□□ 1.04
SNX3-203ENST00000368979 RPH3AQ9Y2J0 694 aaPredicted RBP21.54■■□□□ 1.04
SNX3-203ENST00000368979 H3BML4 177 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 ARPC3O15145 178 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 RFPL3SP0C7P2 107 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 IMPDH2P12268 514 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 FKBP2P26885 142 aaKnown RBP21.53■■□□□ 1.04
SNX3-203ENST00000368979 GRPRP30550 384 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 IDUAP35475 653 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 RPL4P36578 427 aaKnown RBP21.53■■□□□ 1.04
SNX3-203ENST00000368979 SLC15A1P46059 708 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 PIGFQ07326 219 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 MFSD13AQ14CX5 517 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 ALG10Q5BKT4 473 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 SLC35F1Q5T1Q4 408 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 SLC6A19Q695T7 634 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 AHSA2Q719I0 299 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 ATP6V1C2Q8NEY4 427 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 ERMAPQ96PL5 475 aaPredicted RBP21.53■■□□□ 1.04
SNX3-203ENST00000368979 ERVK-18Q9QC07 812 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 SEC14L4Q9UDX3 406 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 SSUH2Q9Y2M2 353 aa21.53■■□□□ 1.04
SNX3-203ENST00000368979 MRPS18CQ9Y3D5 142 aaKnown RBP21.53■■□□□ 1.04
SNX3-203ENST00000368979 NME2P1O60361 137 aa21.52■■□□□ 1.04
SNX3-203ENST00000368979 MRPS14O60783 128 aaKnown RBP21.52■■□□□ 1.04
SNX3-203ENST00000368979 SP1P08047 785 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms