RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PIP5K1CO60331 668 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 RFPL3O75679 317 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 HNRNPCL4P0DMR1 293 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 GSTM3P21266 225 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 S1PR1P21453 382 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 HLA-DMAP28067 261 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 AVPR2P30518 371 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ARFIP1P53367 373 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 TRAM2Q15035 370 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 TMEM201Q5SNT2 666 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MRPL2Q5T653 305 aaKnown RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 SMARCD3Q6STE5 483 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 NPSR1Q6W5P4 371 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 HSDL2Q6YN16 418 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 GDPGP1Q6ZNW5 385 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 RHBDD1Q8TEB9 315 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 UFD1Q92890 307 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MCHR1Q99705 422 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 OR10A5Q9H207 317 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 IFT46Q9NQC8 304 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 SEMA4GQ9NTN9 838 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 PTGFRNQ9P2B2 879 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 GSTK1Q9Y2Q3 226 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 LNP1A1A4G5 178 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 H3BMH7 237 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 NDUFA2O43678 99 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 SCRG1O75711 98 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MPC2O95563 127 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 CELP19835 753 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 GPR3P46089 330 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZNF81P51508 661 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZNF791Q3KP31 576 aaPredicted RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 DDI2Q5TDH0 399 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 C1orf94Q6P1W5 598 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 C19orf48Q6RUI8 117 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 C17orf107Q6ZR85 190 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 TRILQ7L0X0 811 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 LIX1LQ8IVB5 337 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 NRMQ8IXM6 262 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 GNPDA2Q8TDQ7 276 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 SENP5Q96HI0 755 aaPredicted RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 TBX5Q99593 518 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 WACQ9BTA9 647 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 LANCL2Q9NS86 450 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ACAD8Q9UKU7 415 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZNF443Q9Y2A4 671 aaPredicted RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZFHX4Q86UP3 3567 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 RPS10-NUDT3A0A1W2PQS6 291 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 FAM183AA6NL82 134 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 PRODHO43272 600 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 ADAM11O75078 769 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 CD79BP40259 229 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 INPP1P49441 399 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 CCR4P51679 360 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 ARHGDIBP52566 201 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 ST3GAL3Q11203 375 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 RIN1Q13671 783 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 GLYR1Q49A26 553 aaPredicted RBP9.77□□□□□ -0.85
TPM3-212ENST00000368533 ENTPD8Q5MY95 495 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 LRFN4Q6PJG9 635 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 SAMD14Q8IZD0 417 aaPredicted RBP9.77□□□□□ -0.85
TPM3-212ENST00000368533 LINC00471Q8N535 108 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 MORN4Q8NDC4 146 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 C19orf18Q8NEA5 215 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 OR6M1Q8NGM8 313 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 OR8D4Q8NGM9 314 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 TMEM163Q8TC26 289 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 MOAP1Q96BY2 351 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 SLC41A2Q96JW4 573 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 PINK1Q9BXM7 581 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 PIGUQ9H490 435 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 HEXA-AS1Q9H8Q6 139 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 SLC22A11Q9NSA0 550 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 PCDHGA9Q9Y5G4 932 aaKnown RBP9.77□□□□□ -0.85
TPM3-212ENST00000368533 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 SLC35F4A4IF30 521 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 ZNF98A6NK75 572 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 DUXAA6NLW8 204 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 EFCAB7A8K855 629 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 BET1O15155 118 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 ZNF28P17035 718 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 HOXA6P31267 233 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 SKP1P63208 163 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 CDRT4Q8N9R6 151 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 TMEM255BQ8WV15 326 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 TM9SF4Q92544 642 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 CNOT9Q92600 299 aaKnown RBP9.77□□□□□ -0.85
TPM3-212ENST00000368533 RBPMSQ93062 196 aaKnown RBP9.77□□□□□ -0.85
TPM3-212ENST00000368533 HYLS1Q96M11 299 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 CD180Q99467 661 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 VN1R1Q9GZP7 353 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 B3GAT2Q9NPZ5 323 aa9.77□□□□□ -0.85
TPM3-212ENST00000368533 OTOGLQ3ZCN5 2332 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 A0A1B0GVC2 190 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 A6NIN4 97 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 STX11O75558 287 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 NCR1O76036 304 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 RAF1P04049 648 aa9.76□□□□□ -0.85
TPM3-212ENST00000368533 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms