RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GABARAPL2P60520 117 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 GPR85P60893 370 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CDC42P60953 191 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 PLCXD2Q0VAA5 305 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.01□□□□□ -0.97
TPM3-210ENST00000368530 GXYLT1Q4G148 440 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 WDR88Q6ZMY6 472 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 C16orf47Q6ZP98 133 aaPredicted RBP9.01□□□□□ -0.97
TPM3-210ENST00000368530 PTCHD4Q6ZW05 846 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 KIF18BQ86Y91 864 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 P3H2Q8IVL5 708 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CCDC103Q8IW40 242 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CADM2Q8N3J6 435 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 ACOT11Q8WXI4 607 aaPredicted RBP9.01□□□□□ -0.97
TPM3-210ENST00000368530 RND1Q92730 232 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 ADOQ96SZ5 270 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 DEFB127Q9H1M4 99 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 TP63Q9H3D4 680 aaPredicted RBP9.01□□□□□ -0.97
TPM3-210ENST00000368530 ANKRD19PQ9H560 264 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 EGLN3Q9H6Z9 239 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 ZDHHC11Q9H8X9 412 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 SCN3BQ9NY72 215 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 MPDZO75970 2070 aa9.01□□□□□ -0.97
TPM3-210ENST00000368530 TRBV11-1A0A0K0K1C0 115 aa9□□□□□ -0.97
TPM3-210ENST00000368530 SMIM31A0A1B0GVY4 71 aa9□□□□□ -0.97
TPM3-210ENST00000368530 A0A1B0GWA3 101 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GNB5O14775 395 aa9□□□□□ -0.97
TPM3-210ENST00000368530 OIP5O43482 229 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GMFGO60234 142 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
TPM3-210ENST00000368530 ICOSLGO75144 302 aa9□□□□□ -0.97
TPM3-210ENST00000368530 HTR1AP08908 422 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CCDC159P0C7I6 412 aa9□□□□□ -0.97
TPM3-210ENST00000368530 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
TPM3-210ENST00000368530 IL12BP29460 328 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ACAA2P42765 397 aaKnown RBP9□□□□□ -0.97
TPM3-210ENST00000368530 OMPP47874 163 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ART1P52961 327 aa9□□□□□ -0.97
TPM3-210ENST00000368530 DLX5P56178 289 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PMPCAQ10713 525 aa9□□□□□ -0.97
TPM3-210ENST00000368530 RTL6Q6ICC9 239 aa9□□□□□ -0.97
TPM3-210ENST00000368530 MBOAT2Q6ZWT7 520 aa9□□□□□ -0.97
TPM3-210ENST00000368530 TMCO5AQ8N6Q1 288 aa9□□□□□ -0.97
TPM3-210ENST00000368530 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PFN4Q8NHR9 129 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PHOSPHO1Q8TCT1 267 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ZNF566Q969W8 418 aa9□□□□□ -0.97
TPM3-210ENST00000368530 IL4I1Q96RQ9 567 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PRSS27Q9BQR3 290 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PLA2G12AQ9BZM1 189 aa9□□□□□ -0.97
TPM3-210ENST00000368530 YIPF3Q9GZM5 350 aa9□□□□□ -0.97
TPM3-210ENST00000368530 AMBNQ9NP70 447 aa9□□□□□ -0.97
TPM3-210ENST00000368530 KCNJ16Q9NPI9 418 aa9□□□□□ -0.97
TPM3-210ENST00000368530 TVP23BQ9NYZ1 205 aa9□□□□□ -0.97
TPM3-210ENST00000368530 RPS6KB2Q9UBS0 482 aa9□□□□□ -0.97
TPM3-210ENST00000368530 KCNN3Q9UGI6 736 aa9□□□□□ -0.97
TPM3-210ENST00000368530 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
TPM3-210ENST00000368530 TPRKBQ9Y3C4 175 aa9□□□□□ -0.97
TPM3-210ENST00000368530 SNX5Q9Y5X3 404 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PCNX3Q9H6A9 2034 aa9□□□□□ -0.97
TPM3-210ENST00000368530 A0A0G2JMM0 328 aa9□□□□□ -0.97
TPM3-210ENST00000368530 A0A1W2PPB8 328 aa9□□□□□ -0.97
TPM3-210ENST00000368530 A0A1W2PRS3 328 aa9□□□□□ -0.97
TPM3-210ENST00000368530 OR6C76A6NM76 312 aa9□□□□□ -0.97
TPM3-210ENST00000368530 FAM90A27PA6NNH2 459 aa9□□□□□ -0.97
TPM3-210ENST00000368530 VGLL3A8MV65 326 aa9□□□□□ -0.97
TPM3-210ENST00000368530 KIR3DP1A8MWS1 328 aa9□□□□□ -0.97
TPM3-210ENST00000368530 H3BSA7 217 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GTPBP1O00178 669 aaKnown RBP9□□□□□ -0.97
TPM3-210ENST00000368530 SCDO00767 359 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ZNF354AO60765 605 aaPredicted RBP9□□□□□ -0.97
TPM3-210ENST00000368530 FMO6PO60774 539 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GLSO94925 669 aaPredicted RBP9□□□□□ -0.97
TPM3-210ENST00000368530 IFI30P13284 250 aa9□□□□□ -0.97
TPM3-210ENST00000368530 FUT1P19526 365 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GSTM3P21266 225 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CCR4P51679 360 aa9□□□□□ -0.97
TPM3-210ENST00000368530 DCAF7P61962 342 aa9□□□□□ -0.97
TPM3-210ENST00000368530 RNF4P78317 190 aa9□□□□□ -0.97
TPM3-210ENST00000368530 COX10Q12887 443 aa9□□□□□ -0.97
TPM3-210ENST00000368530 TSPAN31Q12999 210 aa9□□□□□ -0.97
TPM3-210ENST00000368530 PMS2P3Q13401 168 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GINS1Q14691 196 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CD226Q15762 336 aa9□□□□□ -0.97
TPM3-210ENST00000368530 KLHL26Q53HC5 615 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CLEC12AQ5QGZ9 265 aa9□□□□□ -0.97
TPM3-210ENST00000368530 SLX4IPQ5VYV7 408 aa9□□□□□ -0.97
TPM3-210ENST00000368530 AP1ARQ63HQ0 302 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ZNF613Q6PF04 617 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CASP12Q6UXS9 341 aa9□□□□□ -0.97
TPM3-210ENST00000368530 CD300LDQ6UXZ3 194 aa9□□□□□ -0.97
TPM3-210ENST00000368530 AHSA2Q719I0 299 aa9□□□□□ -0.97
TPM3-210ENST00000368530 ZNF550Q7Z398 422 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GPR141Q7Z602 305 aa9□□□□□ -0.97
TPM3-210ENST00000368530 GRAMD2AQ8IUY3 354 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms