RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 OR3A2P47893 321 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 SLC17A1Q14916 467 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 LRRC23Q53EV4 343 aaPredicted RBP19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 CYBRD1Q53TN4 286 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 OTUD3Q5T2D3 398 aaPredicted RBP19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 ZNF613Q6PF04 617 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 LINC00114Q6XXX2 140 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 C22orf34Q6ZV56 151 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 P3H2Q8IVL5 708 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 MFSD8Q8NHS3 518 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 ADPRHL2Q9NX46 363 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 SH3GLB1Q9Y371 365 aa19.9■□□□□ 0.78
ECHDC1-203ENST00000368291 ABCA4P78363 2273 aa19.89■□□□□ 0.78
ECHDC1-203ENST00000368291 AQP7P3A6NL99 342 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 CPSF4LA6NMK7 179 aaKnown RBP19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 C16orf97H3BN30 126 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 AHSA1O95433 338 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 DAZAP2Q15038 168 aaPredicted RBP19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 SWT1Q5T5J6 900 aaKnown RBP19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 GKAP1Q5VSY0 366 aaPredicted RBP19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 WDR88Q6ZMY6 472 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 GALNT5Q7Z7M9 940 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 STK32CQ86UX6 486 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 CARM1Q86X55 608 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 GABRG1Q8N1C3 465 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 ADAMTS16Q8TE57 1224 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 PROX1Q92786 737 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 TAAR8Q969N4 342 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 WFIKKN1Q96NZ8 548 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 TAPBPLQ9BX59 468 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 PRSS50Q9UI38 385 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 BAG5Q9UL15 447 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 TESMINQ9Y4I5 508 aa19.89■□□□□ 0.77
ECHDC1-203ENST00000368291 SH3D21A4FU49 640 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 CXCR6O00574 342 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 IFNA14P01570 189 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 PTNP21246 168 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 C5orf46Q6UWT4 87 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 DACH2Q96NX9 599 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 KLHL4Q9C0H6 718 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 SPAG4Q9NPE6 437 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 EMC3Q9P0I2 261 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 SEC14L4Q9UDX3 406 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 SLC9A8Q9Y2E8 581 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 FLVCR1Q9Y5Y0 555 aa19.88■□□□□ 0.77
ECHDC1-203ENST00000368291 NDUFAB1O14561 156 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 GPR171O14626 319 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 CHP2O43745 196 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 CTAG2O75638 210 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 OR1E2P47887 323 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 SELENOWP63302 87 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 FAM69AQ5T7M9 428 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 CCDC197Q8NCU1 140 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 RNF217Q8TC41 542 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 SLC25A36Q96CQ1 311 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 SELENONQ9NZV5 590 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 NDRG3Q9UGV2 375 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 NOSIPQ9Y314 301 aaKnown RBP19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 MAST4O15021 2626 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 PDZD2O15018 2839 aa19.87■□□□□ 0.77
ECHDC1-203ENST00000368291 TRAPPC13A5PLN9 417 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 A6NNC1 897 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 PSMB1P20618 241 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 SLC25A3Q00325 362 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 LTBQ06643 244 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 ANKRD34AQ69YU3 496 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 CXorf67Q86X51 503 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 HRNRQ86YZ3 2850 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 ZIC4Q8N9L1 334 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 TPD52L3Q96J77 140 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 LURAP1Q96LR2 239 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 KCTD14Q9BQ13 255 aaPredicted RBP19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 PRSS27Q9BQR3 290 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 TMEM43Q9BTV4 400 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 SF3B5Q9BWJ5 86 aaKnown RBP19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 CSMD2Q7Z408 3487 aa19.86■□□□□ 0.77
ECHDC1-203ENST00000368291 TRAV36DV7A0A075B6V5 113 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 BGLAPP02818 100 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 NCK1P16333 377 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 KRT72Q14CN4 511 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 Q6ZT83 130 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 PGAM4Q8N0Y7 254 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 RNF148Q8N7C7 305 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 OR9K2Q8NGE7 335 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 ZNF426Q9BUY5 554 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 RASSF1Q9NS23 344 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 ADA2Q9NZK5 511 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 SLC7A7Q9UM01 511 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 ALPK2Q86TB3 2170 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 TACC2O95359 2948 aa19.85■□□□□ 0.77
ECHDC1-203ENST00000368291 OR2T1O43869 369 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 ADAP00813 363 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 GGT1P19440 569 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 TMEM225Q6GV28 225 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 DEF8Q6ZN54 512 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 CBLL1Q75N03 491 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 VTCN1Q7Z7D3 282 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 OR6S1Q8NH40 331 aa19.84■□□□□ 0.77
ECHDC1-203ENST00000368291 SLC41A3Q96GZ6 507 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms