RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SLC35F6Q8N357 371 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF614Q8N883 585 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 SYT14Q8NB59 555 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 DEFB108BQ8NET1 73 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 METTL6Q8TCB7 284 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMIGD2Q96BF3 282 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 FAM120BQ96EK7 910 aaKnown RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCT8L2Q96SF2 557 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF382Q96SR6 550 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 RBM4BQ9BQ04 359 aaKnown RBP7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 KCNS3Q9BQ31 491 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 SYT3Q9BQG1 590 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 LAT2Q9GZY6 243 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 PIGUQ9H490 435 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 NOX3Q9HBY0 568 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 TNFRSF12AQ9NP84 129 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 OBP2BQ9NPH6 170 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 GRHL1Q9NZI5 618 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 FZR1Q9UM11 496 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 SLC9A8Q9Y2E8 581 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 PPP2R2CQ9Y2T4 447 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZC3H12DA2A288 527 aaKnown RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 TRIM49D1C9J1S8 452 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 AKAP10O43572 662 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SYNGR3O43761 229 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 EIF4E2O60573 245 aaKnown RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CDC14BO60729 498 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SMIM24O75264 130 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 UPK3AO75631 287 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CYP7B1O75881 506 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 RBP1P09455 135 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 UBTFL6P0CB48 400 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 NAT2P11245 290 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 FPR2P25090 351 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 MAGEA8P43361 318 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 MAGEB1P43366 347 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SELENOPP49908 381 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 POU3F1Q03052 451 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SNTB2Q13425 540 aaKnown RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CBFBQ13951 182 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 KIAA0040Q15053 153 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 RASA2Q15283 850 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 MAPK14Q16539 360 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 BEAN1Q3B7T3 259 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 C3orf36Q3SXR2 165 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SLC9B1Q4ZJI4 515 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF311Q5JNZ3 666 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SPDYAQ5MJ70 313 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF678Q5SXM1 525 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 C1QTNF12Q5T7M4 302 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 NOXRED1Q6NXP6 359 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCDC91Q7Z6B0 441 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 ST8SIA1Q92185 356 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMEM45BQ96B21 275 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 ANKRD27Q96NW4 1050 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMEM237Q96Q45 408 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 ALKBH3Q96Q83 286 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 DPH5Q9H2P9 285 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 SRA1Q9HD15 236 aaKnown RBP7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 MMP26Q9NRE1 261 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 DUSP22Q9NRW4 184 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 GPATCH2Q9NW75 528 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMEM45AQ9NWC5 275 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CHRNA9Q9UGM1 479 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CCL27Q9Y4X3 112 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 MMP24Q9Y5R2 645 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 CACNG2Q9Y698 323 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 WNK2Q9Y3S1 2297 aa7.23□□□□□ -1.25
HMGB1P39-201ENST00000366304 DNAH3Q8TD57 4116 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 MDFIC2A0A1B0GVS7 189 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 G3V4G9 280 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 H3BNH8 94 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 CLDN34H7C241 214 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 M0R233 179 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 EREGO14944 169 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 EIF3HO15372 352 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 DNPH1O43598 174 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 FCMRO60667 390 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 ICMTO60725 284 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 RSL1D1O76021 490 aaKnown RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 URI1O94763 535 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 GSNP06396 782 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 GSTA2P09210 222 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 BCKDHAP12694 445 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 CBR1P16152 277 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 ATP6V1C1P21283 382 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 NR4A1P22736 598 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 HMOX2P30519 316 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 GSTM5P46439 218 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 SERPINB8P50452 374 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 P2RY4P51582 365 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 LCN2P80188 198 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 DAG1Q14118 895 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 ALKBH6Q3KRA9 238 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 AAED1Q7RTV5 226 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 HMGN2P46Q86SG4 172 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 MDP1Q86V88 176 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms