RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PPICP45877 212 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 HTR5AP47898 357 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ADARB1P78563 741 aaKnown RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 EMX1Q04741 257 aaPredicted RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 IDSB3KWA1 339 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PSMB10P40306 273 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PTH2RP49190 550 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 COL28A1Q2UY09 1125 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 CYHR1Q6ZMK1 362 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 SGPP2Q8IWX5 399 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PHB2Q99623 299 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PPIL1Q9Y3C6 166 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 LYRM1O43325 122 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ELAVL4P26378 380 aaKnown RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 CA5AP35218 305 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 P2RX1P51575 399 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ERVK-16P61578 105 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ZNF169Q14929 603 aaPredicted RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 ARHGAP11BQ3KRB8 267 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 CNIH2Q6PI25 160 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 GDF7Q7Z4P5 450 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 EGLN3Q9H6Z9 239 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 WDR76Q9H967 626 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 A0A087WV62 115 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 H3BMQ9 156 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 FCGR2AP12318 317 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 STT3AP46977 705 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 METTL11BQ5VVY1 283 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 PLCXD3Q63HM9 321 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 COG8Q96MW5 612 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 LAMB2P55268 1798 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 FAM230AA0A1W2PPH8 454 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 TSPAN11A1L157 253 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 OPN1LWP04000 364 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 FBXO45P0C2W1 286 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 AKAIN1P0CW23 69 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 CDK4P11802 303 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 IL10RAQ13651 578 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 LRRC28Q86X40 367 aaPredicted RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 MYO7AQ13402 2215 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 LOC105369274A0A096LPK9 316 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 A0A1W2PR48 441 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 CTSLP07711 333 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 ST6GAL1P15907 406 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 AKR1C4P17516 323 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 COX20Q5RI15 118 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 TMEM71Q6P5X7 295 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 MEX3DQ86XN8 651 aaKnown RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 OR4N4Q8N0Y3 316 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 OR6T1Q8NGN1 323 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 NPRL2Q8WTW4 380 aa12.46□□□□□ -0.41
LDB3-202ENST00000361373 QRSL1Q9H0R6 528 aaKnown RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 WSB2Q9NYS7 404 aaPredicted RBP12.46□□□□□ -0.41
LDB3-202ENST00000361373 ACOT8O14734 319 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 SMAD9O15198 467 aaKnown RBP12.46□□□□□ -0.42
LDB3-202ENST00000361373 IFNA1P01562 189 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 GABRA5P31644 462 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 AKR1D1P51857 326 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 SF3A2Q15428 464 aaKnown RBP12.46□□□□□ -0.42
LDB3-202ENST00000361373 C1orf140Q5VVS0 124 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 HBMQ6B0K9 141 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 H1FNTQ75WM6 255 aaPredicted RBP12.46□□□□□ -0.42
LDB3-202ENST00000361373 SLC35D2Q76EJ3 337 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 OR11L1Q8NGX0 322 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 STT3BQ8TCJ2 826 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 NRG4Q8WWG1 115 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 KNL1Q8NG31 2342 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 SLC16A6O15403 523 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 METTL9Q9H1A3 318 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 CDCP1Q9H5V8 836 aa12.46□□□□□ -0.42
LDB3-202ENST00000361373 KLF13Q9Y2Y9 288 aaPredicted RBP12.46□□□□□ -0.42
LDB3-202ENST00000361373 IFNA2P01563 188 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SERPINE2P07093 398 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 HTR1FP30939 366 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 LSSP48449 732 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 DAPP51397 102 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 MFAP5Q13361 173 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 MYEOVQ96EZ4 313 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 PRKRAO75569 313 aaKnown RBP12.45□□□□□ -0.42
LDB3-202ENST00000361373 LGI1O95970 557 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 GABRG2P18507 467 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 SIRPAP78324 504 aa12.45□□□□□ -0.42
LDB3-202ENST00000361373 FOXK2Q01167 660 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms