RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 GPR171O14626 319 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 HES5Q5TA89 166 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 HBMQ6B0K9 141 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 AWAT2Q6E213 333 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 XKRXQ6PP77 449 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 LMF1Q96S06 567 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SYT4Q9H2B2 425 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 OR51B6Q9H340 312 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 AGAP5A6NIR3 686 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 P2RX6O15547 441 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 STK17BO94768 372 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FOLR1P15328 257 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SLC1A3P43003 542 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 TBCEQ15813 527 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ZNF793Q6ZN11 406 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 DPY19L2P2Q6ZN68 376 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 LRRC56Q8IYG6 542 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 ARL5BQ96KC2 179 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 HCAR1Q9BXC0 346 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FN3KQ9H479 309 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 PRR35P0CG20 571 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 IRF2P14316 349 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 IL32P24001 234 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 FAM205BPQ63HN1 556 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 ZNF517Q6ZMY9 492 aaPredicted RBP12.77□□□□□ -0.36
CTR9-201ENST00000361367 KLHDC8BQ8IXV7 354 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 DNAJC22Q8N4W6 341 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 OR51E2Q9H255 320 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 LRFN1Q9P244 771 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 WASF3Q9UPY6 502 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.36
CTR9-201ENST00000361367 AK6Q9Y3D8 172 aaKnown RBP12.77□□□□□ -0.36
CTR9-201ENST00000361367 LOC285556D6RIA3 1793 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 OR2J2O76002 312 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 MT-CO3P00414 261 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 TPOP07202 933 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 MAGEA2P43356 314 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 GLYR1Q49A26 553 aaPredicted RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 OR2G6Q5TZ20 316 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 CALHM2Q9HA72 323 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 ZNF69Q9UC07 566 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 CHRNA9Q9UGM1 479 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 MOKQ9UQ07 419 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 ASB4Q9Y574 426 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 A0A087WUU8 490 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 TMEM72A0PK05 275 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 PIP5K1CO60331 668 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 BCAS1O75363 584 aaPredicted RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 OR7A10O76100 309 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 MT-ATP6P00846 226 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 TFPTP0C1Z6 253 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 ZNF35P13682 527 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 FASLGP48023 281 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 SIRPAP78324 504 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 TEX19Q8NA77 164 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 OR1L3Q8NH93 324 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 DMRTB1Q96MA1 342 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 MEPEQ9NQ76 525 aaPredicted RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
CTR9-201ENST00000361367 FAM186AA6NE01 2351 aa12.77□□□□□ -0.37
CTR9-201ENST00000361367 WDR34Q96EX3 536 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 BCL7BQ9BQE9 202 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 ACER3Q9NUN7 267 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 VSX1Q9NZR4 365 aaPredicted RBP12.76□□□□□ -0.37
CTR9-201ENST00000361367 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
CTR9-201ENST00000361367 ICOSLGO75144 302 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 OR8G3PP0DMU2 310 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
CTR9-201ENST00000361367 FXYD6P3P58550 94 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 PPP1CAP62136 330 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 PUDPQ08623 228 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 IL11RAQ14626 422 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 BAIAP2L2Q6UXY1 529 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 YRDCQ86U90 279 aaKnown RBP12.76□□□□□ -0.37
CTR9-201ENST00000361367 LRRC18Q8N456 261 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 CPT1CQ8TCG5 803 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 ARSGQ96EG1 525 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 CLDN24A6NM45 220 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 SPINT1O43278 529 aa12.76□□□□□ -0.37
CTR9-201ENST00000361367 ZNF16P17020 682 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms