RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MBNL2Q5VZF2 373 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 TIFABQ6ZNK6 161 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 R3HCC1LQ7Z5L2 792 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 DDIASQ8IXT1 998 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 LRRC34Q8IZ02 419 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM123Q8N131 208 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR9K2Q8NGE7 335 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 TSSK3Q96PN8 268 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 MECRQ9BV79 373 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 MRPL37Q9BZE1 423 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ALG9Q9H6U8 611 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NOL11Q9H8H0 719 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF224Q9NZL3 707 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 CHRNA9Q9UGM1 479 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMED5Q9Y3A6 229 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 C17orf100A8MU93 164 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 FTCDNL1E5RQL4 147 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 H3BNH8 94 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ERLIN1O75477 346 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 GABRA3P34903 492 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 SESN3P58005 492 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 POU6F2P78424 691 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 AANATQ16613 207 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 METAP1DQ6UB28 335 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 C5orf46Q6UWT4 87 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 LRIG3Q6UXM1 1119 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF619Q8N2I2 560 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR52E4Q8NGH9 312 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR52N5Q8NH56 324 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 STK35Q8TDR2 534 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 DOK4Q8TEW6 326 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 CDKL2Q92772 493 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 COQ8BQ96D53 544 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 FBXO17Q96EF6 278 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 CYSLTR2Q9NS75 346 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 POU2F3Q9UKI9 436 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 VDAC3Q9Y277 283 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 M0R233 179 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 PGRMC1O00264 195 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 DHHO43323 396 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 HPXP02790 462 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ALOX5P09917 674 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 UBL4AP11441 157 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 NTSP30990 170 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC6A9P48067 706 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 VPS41P49754 854 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF75DP51815 510 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CCNG1P51959 295 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 MERTKQ12866 999 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 DCAF12L2Q5VW00 463 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CREB3L2Q70SY1 520 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ANKRD46Q86W74 232 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 EPHX4Q8IUS5 362 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SPC24Q8NBT2 197 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 MAGOHBQ96A72 148 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 B9D2Q9BPU9 175 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 WACQ9BTA9 647 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ACTRT3Q9BYD9 372 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 EVA1AQ9H8M9 152 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM181Q9P2C4 612 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF180Q9UJW8 692 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 TRAF6Q9Y4K3 522 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 POC1B-GALNT4F8VUJ3 575 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLU7O95391 586 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 AGR2O95994 175 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 KNG1P01042 644 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 GALK2Q01415 458 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CBLN3Q6UW01 205 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 LRRC28Q86X40 367 aaPredicted RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 GALNT4Q8N4A0 578 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR56A1Q8NGH5 318 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 PATZ1Q9HBE1 687 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLCO1C1Q9NYB5 712 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 GPR160Q9UJ42 338 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 TCRBV9S1A1TA0A576 114 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SUPT3HB4E1H0 165 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SUPT3HO75486 399 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 MPZL1O95297 269 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 KRT6AP02538 564 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 MT-ND5P03915 603 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 KRT6BP04259 564 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ADRA2AP08913 450 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 HSD17B3P37058 310 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 KRT6CP48668 564 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 NCBP2P52298 156 aaKnown RBP eCLIP5.05□□□□□ -1.62e-12■■■□□ 16.2
CDC42SE2-201ENST00000360515 SLC12A2P55011 1212 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 DAG1Q14118 895 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 HERPUD1Q15011 391 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 TOMM34Q15785 309 aaPredicted RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CPSF6Q16630 551 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 FBXO48Q5FWF7 155 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CRIP3Q6Q6R5 217 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 DTX3Q8N9I9 347 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 FBXO36Q8NEA4 188 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms