RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 VRK2Q86Y07 508 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 PUSL1Q8N0Z8 303 aaKnown RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 LNX2Q8N448 690 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 TNFAIP8L1Q8WVP5 186 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 PHYHIPLQ96FC7 376 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 RIOK2Q9BVS4 552 aaKnown RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 HCAR1Q9BXC0 346 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 CMC2Q9NRP2 79 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 FOXJ3Q9UPW0 622 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 LINC00587B1AMM8 73 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 GPR31O00270 319 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 BHLHE40O14503 412 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 SMIM6P0DI80 62 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 PRKAR1BP31321 381 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 FNTBP49356 437 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 NCBP2P52298 156 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 EPHB3P54753 998 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 SORDQ00796 357 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 ILF3Q12906 894 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 CDK5R1Q15078 307 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF600Q6ZNG1 722 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 Q6ZVL8 140 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 LMNTD1Q8N9Z9 388 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 GLYATL2Q8WU03 294 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 MOAP1Q96BY2 351 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 OR51V1Q9H2C8 321 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 PLEKHM1Q9Y4G2 1056 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 KANTRA0A1W2PQU2 76 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM218A2RU14 115 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 OR6C74A6NCV1 312 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 IFITM5A6NNB3 132 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 MOSPD3O75425 235 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 PAK4O96013 591 aaPredicted RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 CD1AP06126 327 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 FABP1P07148 127 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 DPP4P27487 766 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 NR0B1P51843 470 aaKnown RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TAS2R38P59533 333 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TEAD2Q15562 447 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 C2orf68Q2NKX9 166 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 HES5Q5TA89 166 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 FCRLAQ7L513 359 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 OR6S1Q8NH40 331 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 CD180Q99467 661 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 RSPH9Q9H1X1 276 aaPredicted RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 SLC38A1Q9H2H9 487 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 PLXNA2O75051 1894 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 CXorf51AA0A1B0GTR3 108 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 HMGN2P05204 90 aaKnown RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 ACTA2P62736 377 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TRA2BP62995 288 aaKnown RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 ACTG2P63267 376 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TNFRSF17Q02223 184 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TGM3Q08188 693 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 CBFBQ13951 182 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 FAM74A1Q5RGS3 127 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 PARM1Q6UWI2 310 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 GAREM2Q75VX8 874 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 SERPINA12Q8IW75 414 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 OR56A1Q8NGH5 318 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 FGF14Q92915 247 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM138Q9NPI0 162 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 HAO2Q9NYQ3 351 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 MYEF2Q9P2K5 600 aaKnown RBP13.73□□□□□ -0.21
UBAP1-202ENST00000359544 ADAM29Q9UKF5 820 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 MYO10Q9HD67 2058 aa13.73□□□□□ -0.21
UBAP1-202ENST00000359544 SULT1C2O00338 296 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 RAD1O60671 282 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 TBX6O95947 436 aaPredicted RBP13.72□□□□□ -0.21
UBAP1-202ENST00000359544 RLN1P04808 185 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 S100A9P06702 114 aaKnown RBP13.72□□□□□ -0.21
UBAP1-202ENST00000359544 ACHEP22303 614 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 GABRR2P28476 465 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 NOS3P29474 1203 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 CD70P32970 193 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 PPP2CBP62714 309 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 PPP2CAP67775 309 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 STX4Q12846 297 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 SERTAD2Q14140 314 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 DCAF12L2Q5VW00 463 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 Q6ZNB5 142 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 SYNPRQ8TBG9 265 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 OR14A2Q96R54 314 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
UBAP1-202ENST00000359544 ENKD1Q9H0I2 346 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms