RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ZNF587BE7ETH6 402 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 GPR37O15354 613 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 CYTIPO60759 359 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PRKACAP17612 351 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 CD6P30203 668 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 DUSP2Q05923 314 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ACKR1Q16570 336 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ZNF626Q68DY1 528 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 GPRIN1Q7Z2K8 1008 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 OR6F1Q8NGZ6 308 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 A6NIZ1 184 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PRAMEF26H0Y7S4 382 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 MAGEB4O15481 346 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 PLAUP00749 431 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RBP4P02753 201 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 METTL15P1P0C7V9 234 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PVRP15151 417 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RAP1BP61224 184 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RAP1AP62834 184 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 NXNL2Q5VZ03 156 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 OR52E8Q6IFG1 317 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PIWIL3Q7Z3Z3 882 aaKnown RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 NRMQ8IXM6 262 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 MMP21Q8N119 569 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RIMS4Q9H426 269 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 PREBQ9HCU5 417 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 A0A0D9SG52 128 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 OR52A4PA6NMU1 304 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ABHD16AO95870 558 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ENPP1P22413 925 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 MOGQ16653 247 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SLC36A2Q495M3 483 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 UNC5DQ6UXZ4 953 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 OR52N5Q8NH56 324 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PLK3Q9H4B4 646 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TAS2R16Q9NYV7 291 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 VAPAQ9P0L0 249 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TCFL5Q9UL49 500 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 BMPR1BO00238 502 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PPIHO43447 177 aaKnown RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 C18orf21Q32NC0 220 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 PIP5KL1Q5T9C9 394 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 NDUFAF7Q7L592 441 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 OR2M2Q96R28 347 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SLC35D1Q9NTN3 355 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 LHX6Q9UPM6 363 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TRAV27A0A087WT01 109 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ZNF716A6NP11 495 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 KLF11O14901 512 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ACRV1P26436 265 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 UGT3A2Q3SY77 523 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 LILRB1Q8NHL6 650 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 CORO2AQ92828 525 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ARL11Q969Q4 196 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TIMP4Q99727 224 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 XYLT2Q9H1B5 865 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ARMC1Q9NVT9 282 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RICTORQ6R327 1708 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 KCPQ6ZWJ8 1503 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 CKMT2P17540 419 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TRHRP34981 398 aaPredicted RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 ASCL1P50553 236 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 INHBCP55103 352 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 TAS2R38P59533 333 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ABHD18Q0P651 414 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SNTB2Q13425 540 aaKnown RBP9.12□□□□□ -0.95
CHD3-202ENST00000358181 RAB6CQ53S08 254 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 ZNF788Q6ZQV5 615 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SLC35F3Q8IY50 421 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 DNAJB8Q8NHS0 232 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 FBXO17Q96EF6 278 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SLC35E1Q96K37 410 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SRRQ9GZT4 340 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RAB6CQ9H0N0 254 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PRELID3BQ9Y3B1 194 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 PTGDR2Q9Y5Y4 395 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 RGPD2P0DJD1 1756 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 K7ERQ8 282 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 GPR31O00270 319 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 DEGS1O15121 323 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 SLITRK5O94991 958 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 C1orf105O95561 183 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 RAB3DO95716 219 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 IGHG1P01857 330 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 FAM157BP0CG42 384 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ERP29P30040 261 aaKnown RBP9.11□□□□□ -0.95
CHD3-202ENST00000358181 PSMB2P49721 201 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 SUB1P53999 127 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD3-202ENST00000358181 TNK1Q13470 666 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 ADIRFQ15847 76 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 NPSR1Q6W5P4 371 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 GPR32P1Q8NGA4 272 aa9.11□□□□□ -0.95
CHD3-202ENST00000358181 OR8B4Q96RC9 309 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms