RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SERTAD3Q9UJW9 196 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TBX21Q9UL17 535 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 IRAK3Q9Y616 596 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TBC1D3EA0A087X179 549 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 CENPVL1A0A0U1RR11 272 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 A0A1B0GW55 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 UBE2QL1A1L167 161 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 MAGEB4O15481 346 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ATG12O94817 140 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 SOD2P04179 222 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 PTHLHP12272 177 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ZNF3P17036 446 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 HIST1H1TP22492 207 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GABRR2P28476 465 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 HCCSP53701 268 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TAS2R20P59543 309 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GMFBP60983 142 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DCDP81605 110 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GAS6Q14393 721 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 UQCC3Q6UW78 93 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 PARS2Q7L3T8 475 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 PDCD1LG2Q9BQ51 273 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GINS4Q9BRT9 223 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TRBV2A0A0J9YWF9 115 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 LINC01387J3KSC0 135 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GLSO94925 669 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 GP1BAP07359 652 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 CLTBP09497 229 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 CNR1P21554 472 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 SLC16A1P53985 500 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DEFA5Q01523 94 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 OC90Q02509 493 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 LTB4RQ15722 352 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ARHGAP11BQ3KRB8 267 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 FCRLBQ6BAA4 426 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR2L13Q8N349 312 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 POMGNT2Q8NAT1 580 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 DMBX1Q8NFW5 382 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR9A2Q8NGT5 310 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 RGP1Q92546 391 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 MS4A6EQ96DS6 147 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 EQTNQ9NQ60 294 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ETV7Q9Y603 341 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 H7C2Y5 167 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 H7C417 338 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 GOSR2O14653 212 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 MELTFP08582 738 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 SYN1P17600 705 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 GPR85P60893 370 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 DPTQ07507 201 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 RPE65Q16518 533 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 C10orf91Q5T1B1 145 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 C18orf63Q68DL7 685 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 RANBP3LQ86VV4 465 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 LINC01555Q8NAE3 123 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 CYB561A3Q8NBI2 242 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 SLC16A11Q8NCK7 471 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 TCEAL4Q96EI5 215 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 LRFN5Q96NI6 719 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 FAM117AQ9C073 453 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 CCDC86Q9H6F5 360 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 MEPEQ9NQ76 525 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 MTFP1Q9UDX5 166 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 V9GY05 133 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 FMO6PO60774 539 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 CD8AP01732 235 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 GYPBP06028 91 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 C8orf89P0DMQ9 161 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 MPIP34949 423 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 RAB13P51153 203 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 SCRN3Q0VDG4 424 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 COL9A2Q14055 689 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR1Q1Q15612 314 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 EIPR1Q53HC9 387 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 LY6G6FQ5SQ64 297 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 MFSD12Q6NUT3 480 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 CNKSR3Q6P9H4 555 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 ACOT4Q8N9L9 421 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 SCLYQ96I15 445 aa11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 TRMT61BQ9BVS5 477 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-201ENST00000357276 WDR13Q9H1Z4 485 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms