RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SHPKQ9UHJ6 478 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SYT5O00445 386 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 BMP1P13497 986 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 GPX2P18283 190 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 HTR2CP28335 458 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 DEFA6Q01524 100 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 PAQR9Q6ZVX9 377 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 PXT1Q8NFP0 134 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 OR52N1Q8NH53 320 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SDSLQ96GA7 329 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 MED30Q96HR3 178 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 HHIPL1Q96JK4 782 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 NIPSNAP1Q9BPW8 284 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ANKRD19PQ9H560 264 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 YY2O15391 372 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 IMPA1P29218 277 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SSX2Q16385 188 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.25e-10■■■■■ 31.7
CHD4-201ENST00000357008 ST7LQ8TDW4 575 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 TMEM38AQ9H6F2 299 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ZNF286AQ9HBT8 521 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 A4GALTQ9NPC4 353 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ETV7Q9Y603 341 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 F13BP05160 661 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 OR5K2Q8NHB8 316 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ZBED3Q96IU2 234 aaPredicted RBP13.82□□□□□ -0.2
CHD4-201ENST00000357008 KATNB1Q9BVA0 655 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 QRSL1Q9H0R6 528 aaKnown RBP13.82□□□□□ -0.2
CHD4-201ENST00000357008 C1orf123Q9NWV4 160 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 CNMDO75829 334 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 TK1P04183 234 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CYBAP13498 195 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 DCAF7P61962 342 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 RPS18P62269 152 aaKnown RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 GPR176Q14439 515 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CADM3Q8N126 398 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SLC7A6Q92536 515 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 RSC1A1Q92681 617 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CMSS1Q9BQ75 279 aaKnown RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 SIDT1Q9NXL6 827 aaKnown RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 LRP6O75581 1613 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 TCRBV5S1A1TA0A578 114 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 TMEM72A0PK05 275 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 PRAMEF26H0Y7S4 382 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CPNE6O95741 557 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SLC7A9P82251 487 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 HIST2H3PS2Q5TEC6 136 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CD276Q5ZPR3 534 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SLCO4C1Q6ZQN7 724 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 MFSD9Q8NBP5 474 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 NEURL3Q96EH8 262 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 MCOLN1Q9GZU1 580 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CUTCQ9NTM9 273 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 D6RAR5 112 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 MSTNO14793 375 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 LALBAP00709 142 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 HOXA9P31269 272 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SNRPGP62308 76 aaKnown RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 BTG1P62324 171 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 MFGE8Q08431 387 aaPredicted RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 Q6ZSR6 202 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 ZNF765Q7L2R6 523 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 NLGN4YQ8NFZ3 816 aaPredicted RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 PCNPQ8WW12 178 aaKnown RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 TMEM106AQ96A25 262 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SGK3Q96BR1 496 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 ICMTO60725 284 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 CD79AP11912 226 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 ZNF28P17035 718 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 OTX2P32243 289 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 SLCO5A1Q9H2Y9 848 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 M6PRP20645 277 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
CHD4-201ENST00000357008 NFATC4Q14934 902 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 LTB4RQ15722 352 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 PGBD5Q8N414 524 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 FOXN4Q96NZ1 517 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 TNFRSF13CQ96RJ3 184 aa13.81□□□□□ -0.2
CHD4-201ENST00000357008 HOXD9P28356 352 aaPredicted RBP13.8□□□□□ -0.2
CHD4-201ENST00000357008 TGM4P49221 684 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ACSM1Q08AH1 577 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 B3GLCTQ6Y288 498 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 METTL9Q9H1A3 318 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 NTN4Q9HB63 628 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 SRPK3Q9UPE1 567 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 ZNF593O00488 134 aaPredicted RBP13.8□□□□□ -0.2
CHD4-201ENST00000357008 MSMO1Q15800 293 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 AVPI1Q5T686 147 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 EID2Q8N6I1 236 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 LKAAEAR1Q8TD35 194 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 RBMXL1Q96E39 390 aaKnown RBP13.8□□□□□ -0.2
CHD4-201ENST00000357008 ARL5BQ96KC2 179 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 SULT1B1O43704 296 aa13.8□□□□□ -0.2
CHD4-201ENST00000357008 HBE1P02100 147 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms