RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GCNT6Q5T4J0 391 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 CGB2Q6NT52 195 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 B3GLCTQ6Y288 498 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 WDFY1Q8IWB7 410 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 UBE2J2Q8N2K1 259 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 KDM8Q8N371 416 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 OR9K2Q8NGE7 335 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 BBS10Q8TAM1 723 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 KTI12Q96EK9 354 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 COX4I2Q96KJ9 171 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 AMBRA1Q9C0C7 1298 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 NPHS2Q9NP85 383 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 ADPRHL2Q9NX46 363 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 MAGED1Q9Y5V3 778 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 ALPK2Q86TB3 2170 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 A0A1W2PP18 115 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 MRPL33O75394 65 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 CNOT4O95628 575 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 LY6G6DO95868 133 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 CD3EP07766 207 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 PAX1P15863 534 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 AQP1P29972 269 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 ZNF83P51522 516 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 CDK6Q00534 326 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 DMTNQ08495 405 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 RUNDC3AQ59EK9 446 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 C1orf140Q5VVS0 124 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 PRAMEF8Q5VWM4 474 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 PRAMEF7Q5VXH5 474 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 EPHX4Q8IUS5 362 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 ZNF446Q9NWS9 450 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 ASB6Q9NWX5 421 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 IFT52Q9Y366 437 aa14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 FN1P02751 2386 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 YLPM1P49750 1951 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-201ENST00000355572 A0A1B0GWA3 101 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 A8MVM7 634 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 GPR171O14626 319 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 SMAD7O15105 426 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 GPIP06744 558 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 ETS2P15036 469 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 NCF2P19878 526 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 FKBP2P26885 142 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 RPS5P46782 204 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 SELENOPP49908 381 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 MTPNP58546 118 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 SCARB2Q14108 478 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 TSPYL5Q86VY4 417 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 TMEM171Q8WVE6 324 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 TMEM45BQ96B21 275 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 MUS81Q96NY9 551 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 NAA11Q9BSU3 229 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 ESRP2Q9H6T0 727 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 THUMPD1Q9NXG2 353 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 TAS2R16Q9NYV7 291 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 B3GAT1Q9P2W7 334 aa14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-201ENST00000355572 CIB4A0PJX0 185 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 CCT8L1PA6NM43 557 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 E7EQL1 145 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 FBP2O00757 339 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 ABCD4O14678 606 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 EIF1BO60739 113 aaKnown RBP14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 FZD7O75084 574 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 OPN1SWP03999 348 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 PNMTP11086 282 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 CBLP22681 906 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 PRKAR1BP31321 381 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 LTBQ06643 244 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 REEP3Q6NUK4 255 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 DHRS4L2Q6PKH6 230 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 C6orf89Q6UWU4 347 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 PRSS57Q6UWY2 283 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 GPAT4Q86UL3 456 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 GPR32P1Q8NGA4 272 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 OR4D11Q8NGI4 311 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 SMAP2Q8WU79 429 aaPredicted RBP14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 TAAR8Q969N4 342 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 FBXW5Q969U6 566 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 SLC25A36Q96CQ1 311 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 NELFAQ9H3P2 528 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 RAD21L1Q9H4I0 556 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 TMEM38AQ9H6F2 299 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 GDF2Q9UK05 429 aaPredicted RBP14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 ZNF232Q9UNY5 417 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 SLC9A8Q9Y2E8 581 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 ARFGEF3Q5TH69 2177 aa14.67□□□□□ -0.06
PDLIM7-201ENST00000355572 CHD3Q12873 2000 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 C5orf58C9J3I9 102 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 ARHGEF9O43307 516 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 UPK3AO75631 287 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 MFN2O95140 757 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 UQCRBP14927 111 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 GZMMP51124 257 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 MAP2K6P52564 334 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 CRYBA2P53672 197 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 ATP5J2P56134 94 aa14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 PCBP3P57721 371 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-201ENST00000355572 COPZ1P61923 177 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms