RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SNCAP37840 140 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 CHRNEQ04844 493 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 OPCMLQ14982 345 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 GATA6Q92908 595 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 TXLNGYQ9BZA5 131 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 SLC39A9Q9NUM3 307 aa13.88□□□□□ -0.19
LMX1B-201ENST00000355497 GABARAPH6UMI1 98 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 GABARAPO95166 117 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 C21orf33P30042 268 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 PTGER1P34995 402 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 BMPR1AP36894 532 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 SRPXP78539 464 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 BAGE3Q86Y29 109 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 BAGE2Q86Y30 109 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 RAB3CQ96E17 227 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 SLC41A2Q96JW4 573 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 CENPOQ9BU64 300 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 FBXL2Q9UKC9 423 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 AP1G1O43747 822 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 ZFAND5O76080 213 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 CASP3P42574 277 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 RAB11AP62491 216 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 C1orf220Q5T0J3 134 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 C15orf54Q8N8G6 183 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 KCTD12Q96CX2 325 aaKnown RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 LRFN5Q96NI6 719 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 QPCTLQ9NXS2 382 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 TAS2R16Q9NYV7 291 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 OSGIN1Q9UJX0 560 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 KRBOX1C9JBD0 128 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 M0QZQ0 153 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 RFXAPO00287 272 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF593O00488 134 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 HTR2CP28335 458 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 MTCP1P56278 107 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 PDE7AQ13946 482 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 HNF4GQ14541 408 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 FRMPD2BQ6IN97 320 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 NPSR1Q6W5P4 371 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 LRRC56Q8IYG6 542 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 NIPAL2Q9H841 368 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 NRIP3Q9NQ35 241 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 WIF1Q9Y5W5 379 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 GALR3O60755 368 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-201ENST00000355497 CTSAP10619 480 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 FOLR1P15328 257 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 NME2P22392 152 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 ACSM1Q08AH1 577 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 LPCAT3Q6P1A2 487 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 DTD2Q96FN9 168 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 MED17Q9NVC6 651 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 PRSS21Q9Y6M0 314 aa13.87□□□□□ -0.19
LMX1B-201ENST00000355497 SUSD5O60279 629 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 IMPA1P29218 277 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 TSPAN31Q12999 210 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 CDONQ4KMG0 1287 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 CD300LGQ6UXG3 332 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 RNF113BQ8IZP6 322 aaKnown RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 OR13C2Q8NGS9 318 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF845Q96IR2 970 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 TMEM59Q9BXS4 323 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 NOX4Q9NPH5 578 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF355PQ9NSJ1 428 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 MOKQ9UQ07 419 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 F13BP05160 661 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 SNRPBP14678 240 aaKnown RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 HIST1H1TP22492 207 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 C9orf135Q5VTT2 229 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 B3GLCTQ6Y288 498 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 FAM234AQ9H0X4 552 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 WASH6PQ9NQA3 447 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 PRSS38A1L453 326 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 OR7C1O76099 320 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF91Q05481 1191 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 SYPL1Q16563 259 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 AVPI1Q5T686 147 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 OR10K1Q8NGX5 313 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 MUCL1Q96DR8 90 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 TPPP3Q9BW30 176 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 KCNK5O95279 499 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 GDNFP39905 211 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 UBE2G2P60604 165 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 OR2G6Q5TZ20 316 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 OPN5Q6U736 354 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 KDM8Q8N371 416 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF566Q969W8 418 aa13.86□□□□□ -0.19
LMX1B-201ENST00000355497 TMX2-CTNND1H3BSU7 103 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms