RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IRF4Q15306 451 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 PLBD1Q6P4A8 553 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 HSD17B13Q7Z5P4 300 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 MORN4Q8NDC4 146 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 STK35Q8TDR2 534 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 GLYATL2Q8WU03 294 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 CHFRQ96EP1 664 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZDHHC12Q96GR4 267 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 PRRC1Q96M27 445 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 MENTQ9BUN1 341 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DDX31Q9H8H2 851 aaKnown RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 ACSS1Q9NUB1 689 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 CACNA1CQ13936 2221 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 KIAA1549LQ6ZVL6 1849 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 A0A0A6YYD5 115 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZC3H12DA2A288 527 aaKnown RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 SLC9B1P1A6NJY1 282 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 C1orf196B1AJZ1 125 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 HYAL3O43820 417 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 HLA-DPB1P04440 258 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 PPP3CBP16298 524 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZNF14P17017 642 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 HIST1H1TP22492 207 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 BMP8BP34820 402 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 TRHRP34981 398 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 DRD3P35462 400 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 LUMP51884 338 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 BTN3A2P78410 334 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 OCLNQ16625 522 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SLC25A35Q3KQZ1 300 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 FAM109BQ6ICB4 259 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NRMQ8IXM6 262 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SHISA5Q8N114 240 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 RAB42Q8N4Z0 105 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NUP43Q8NFH3 380 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 OR4E2Q8NGC2 313 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 OR52E1Q8NGJ3 308 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 AKR7LQ8NHP1 331 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SPRYD4Q8WW59 207 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 COX14Q96I36 57 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 OR7D2Q96RA2 312 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZNF860A6NHJ4 632 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 CASC3O15234 703 aaKnown RBP8.65□□□□□ -1.02
SMG6-202ENST00000354901 GABRA1P14867 456 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 GABRA5P31644 462 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 AHRP35869 848 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 NPBWR1P48145 328 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 RAB28P51157 221 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 GAB4Q2WGN9 574 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 TMEM52BQ4KMG9 183 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 VITQ6UXI7 678 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 USP53Q70EK8 1073 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 NR2C2APQ86WQ0 139 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 TMEFF1Q8IYR6 380 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 SLC16A11Q8NCK7 471 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 SUN3Q8TAQ9 357 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 KCTD12Q96CX2 325 aaKnown RBP8.65□□□□□ -1.02
SMG6-202ENST00000354901 MED20Q9H944 212 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 ING1Q9UK53 422 aaPredicted RBP8.65□□□□□ -1.02
SMG6-202ENST00000354901 ACAD8Q9UKU7 415 aa8.65□□□□□ -1.02
SMG6-202ENST00000354901 PQLC2LA1A4F0 135 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 ANKRD61A6NGH8 418 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 C2orf74A8MZ97 194 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 GPR37O15354 613 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.03
SMG6-202ENST00000354901 ASGR2P07307 311 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 NDUFB7P17568 137 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 CSNK2A2P19784 350 aaPredicted RBP8.65□□□□□ -1.03
SMG6-202ENST00000354901 ACVR1BP36896 505 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.03
SMG6-202ENST00000354901 CHAF1BQ13112 559 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 ARHGAP19Q14CB8 494 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 METAP1DQ6UB28 335 aaPredicted RBP8.65□□□□□ -1.03
SMG6-202ENST00000354901 SLC36A4Q6YBV0 504 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 FGD2Q7Z6J4 655 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.03
SMG6-202ENST00000354901 SVBPQ8N300 66 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 IL17RCQ8NAC3 791 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 OR4D9Q8NGE8 314 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 OR56B4Q8NH76 319 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 OR14C36Q8NHC7 312 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 FGF13Q92913 245 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 MS4A6EQ96DS6 147 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 ZNF75AQ96N20 296 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 PCBD2Q9H0N5 130 aa8.65□□□□□ -1.03
SMG6-202ENST00000354901 NPIPA5A0A0B4J1W7 369 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 NPIPA7E9PJI5 369 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SOCS6O14544 535 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PRODHO43272 600 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CLEC3AO75596 197 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 UBXN7O94888 489 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 IFNA4P05014 189 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 LIMS3P0CW19 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms