RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 IL21RQ9HBE5 538 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SIDT1Q9NXL6 827 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 USP36Q9P275 1121 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 DHCR7Q9UBM7 475 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 LSM7Q9UK45 103 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SCN8AQ9UQD0 1980 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR5H14A6NHG9 310 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ANXA2P07355 339 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TMIGD3P0DMS9 266 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 MPIP34949 423 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 AQP2P41181 271 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ST8SIA6P61647 398 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 RPS15P62841 145 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PPIAP62937 165 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SREBF2Q12772 1141 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR7A5Q15622 319 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 DECR1Q16698 335 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 DMKNQ6E0U4 476 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 C22orf39Q6P5X5 142 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 FAM199XQ6PEV8 388 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TAS1R1Q7RTX1 841 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SERINC5Q86VE9 423 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 CMTM8Q8IZV2 173 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR4K13Q8NH42 304 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PHOSPHO1Q8TCT1 267 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 GRHL3Q8TE85 626 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 C3orf49Q96BT1 292 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TIFAQ96CG3 184 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PFDN5Q99471 154 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 KLF16Q9BXK1 252 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 FOXJ3Q9UPW0 622 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 FARSAQ9Y285 508 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TRAV18A0A075B6X5 111 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 POM121BA6NF01 834 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 H7C4K7 107 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 NPC1O15118 1278 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 AGPAT2O15120 278 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SCAMP1O15126 338 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 KCNAB3O43448 404 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 RCBTB2O95199 551 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 VNN2O95498 520 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 POP4O95707 220 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PTAFRP25105 342 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 EIF2S3LQ2VIR3 472 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 DEFB115Q30KQ5 88 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OVCH1Q7RTY7 1134 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SDR9C7Q8NEX9 313 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR52E2Q8NGJ4 325 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR1J4Q8NGS1 313 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 GLYATL1Q969I3 302 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ARL11Q969Q4 196 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SLC25A38Q96DW6 304 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ALG14Q96F25 216 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 C14orf79Q96F83 325 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR7D2Q96RA2 312 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TIMP4Q99727 224 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 MEPEQ9NQ76 525 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 INPP5EQ9NRR6 644 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF275Q9NSD4 429 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 TINAGQ9UJW2 476 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 NOSIPQ9Y314 301 aaKnown RBP7.04□□□□□ -1.28
BRCA1-201ENST00000352993 SLC22A7Q9Y694 548 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 DENND4AQ7Z401 1863 aa7.04□□□□□ -1.28
BRCA1-201ENST00000352993 OR6C76A6NM76 312 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 KIAA0355O15063 1070 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 NDUFS4O43181 175 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 HTR3BO95264 441 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FBXO45P0C2W1 286 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 ZGLP1P0C6A0 271 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CKBP12277 381 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 LAMP2P13473 410 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 EPCAMP16422 314 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CD53P19397 219 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 S100PP25815 95 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PSMB5P28074 263 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CENPAP49450 140 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PCBP4P57723 403 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 ACTC1P68032 377 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 ACTA1P68133 377 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CDK5R1Q15078 307 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 TEAD2Q15562 447 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 C9orf152Q5JTZ5 239 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 FAM109BQ6ICB4 259 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 THSD4Q6ZMP0 1018 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MOB3CQ70IA8 216 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SLC24A5Q71RS6 500 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 DPPA4Q7L190 304 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 CCDC107Q8WV48 283 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 SMIM19Q96E16 107 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 PELI1Q96FA3 418 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 MRPL48Q96GC5 212 aaKnown RBP7.03□□□□□ -1.28
BRCA1-201ENST00000352993 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 LYSMD1Q96S90 227 aa7.03□□□□□ -1.28
BRCA1-201ENST00000352993 WDR13Q9H1Z4 485 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms