RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RPRD1BQ9NQG5 326 aaKnown RBP20.24■□□□□ 0.83
UPF3A-201ENST00000351487 COPS3Q9UNS2 423 aa20.24■□□□□ 0.83
UPF3A-201ENST00000351487 FLRT2O43155 660 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ERP29P30040 261 aaKnown RBP20.23■□□□□ 0.83
UPF3A-201ENST00000351487 BIKQ13323 160 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 BICRALQ6AI39 1079 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 WBP2NLQ6ICG8 309 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 OVCH1Q7RTY7 1134 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 OR5H6Q8NGV6 325 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ZPLD1Q8TCW7 415 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 PHYHIPQ92561 330 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ABCG5Q9H222 651 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 SLA2Q9H6Q3 261 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 PLSCR3Q9NRY6 295 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ACOXLQ9NUZ1 547 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 GNG8Q9UK08 70 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 BOLA1Q9Y3E2 137 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 CACNG2Q9Y698 323 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 FITM1A5D6W6 292 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 GPRIN2O60269 458 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 SELENOFO60613 162 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 UBL3O95164 117 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 PNMTP11086 282 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 NME1P15531 152 aaKnown RBP20.23■□□□□ 0.83
UPF3A-201ENST00000351487 BTCP35070 178 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 GXYLT1Q4G148 440 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 YIF1BQ5BJH7 314 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 TCTE1Q5JU00 501 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ASB18Q6ZVZ8 466 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 ATG4DQ86TL0 474 aaPredicted RBP20.23■□□□□ 0.83
UPF3A-201ENST00000351487 HAVCR2Q8TDQ0 301 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 RASD2Q96D21 266 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 HSPA12BQ96MM6 686 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.23■□□□□ 0.83
UPF3A-201ENST00000351487 CHRNA10Q9GZZ6 450 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 NIPAL2Q9H841 368 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 EXOSC3Q9NQT5 275 aaKnown RBP20.23■□□□□ 0.83
UPF3A-201ENST00000351487 HIF3AQ9Y2N7 669 aa20.23■□□□□ 0.83
UPF3A-201ENST00000351487 NUP210LQ5VU65 1888 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 TRBV2A0A0J9YWF9 115 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 EEF1E1O43324 174 aaKnown RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 SCO2O43819 266 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ERVK-25P63136 954 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 EFR3AQ14156 821 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 CCDC85BQ15834 202 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 UNQ9370/PRO34162Q6UXP9 181 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 MED25Q71SY5 747 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 SYT13Q7L8C5 426 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 METTL27Q8N6F8 245 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 LMF1Q96S06 567 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 UBQLN4Q9NRR5 601 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 A0A1B0GVC2 190 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 OR6C70A6NIJ9 312 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 A6NIN4 97 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ELOA3DA6NLF2 546 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 GLCEO94923 617 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 APEHP13798 732 aaKnown RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 EDNRAP25101 427 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 RACK1P63244 317 aaKnown RBP20.22■□□□□ 0.83
UPF3A-201ENST00000351487 SKP2Q13309 424 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 COL19A1Q14993 1142 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 CD226Q15762 336 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ELOA3BQ3SY89 546 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 LINC01590Q5TEZ4 76 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 DTX3Q8N9I9 347 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ZNF527Q8NB42 609 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ELOA3Q8NG57 546 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 OR14A2Q96R54 314 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 SLC38A3Q99624 504 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 ING3Q9NXR8 418 aa20.22■□□□□ 0.83
UPF3A-201ENST00000351487 TLCD2A6NGC4 264 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 IMPA2O14732 288 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 C1QBP02746 253 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 CD1CP29017 333 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 GZMKP49863 264 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 MMP15P51511 669 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 FAPQ12884 760 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 ZNF74Q16587 644 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 SLC36A2Q495M3 483 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 FAM122BQ7Z309 247 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 GKN2Q86XP6 184 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 OR6K6Q8NGW6 343 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 LILRB4Q8NHJ6 448 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 MOSPD2Q8NHP6 518 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 CCDC86Q9H6F5 360 aaKnown RBP20.21■□□□□ 0.83
UPF3A-201ENST00000351487 MCUBQ9NWR8 336 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 GMEB2Q9UKD1 530 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 SPTBN5Q9NRC6 3674 aaKnown RBP20.21■□□□□ 0.83
UPF3A-201ENST00000351487 C17orf105B2RV13 164 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 IL33O95760 270 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 WNT1P04628 370 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 UBL4AP11441 157 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 SNRPBP14678 240 aaKnown RBP20.21■□□□□ 0.83
UPF3A-201ENST00000351487 GRK6P43250 576 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 BAIAP2L2Q6UXY1 529 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 LRRC75AQ8NAA5 344 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 ZFAND1Q8TCF1 268 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 AKAP1Q92667 903 aaKnown RBP eCLIP20.21■□□□□ 0.83
UPF3A-201ENST00000351487 CMTM3Q96MX0 182 aa20.21■□□□□ 0.83
UPF3A-201ENST00000351487 SPATA2Q9UM82 520 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms