RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 METRNLQ641Q3 311 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 RBP7Q96R05 134 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 LPAR4Q99677 370 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PLXNB2O15031 1838 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 ZC3H12DA2A288 527 aaKnown RBP13.65□□□□□ -0.22
NUP50-201ENST00000347635 EEF1E1-BLOC1S5C9J1V9 151 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.22
NUP50-201ENST00000347635 ADGRF3Q8IZF5 1079 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 IL22RA1Q8N6P7 574 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 PPIL1Q9Y3C6 166 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 A0A1W2PPL8 197 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 ZNF208O43345 1280 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 AKR7A2O43488 359 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 SOD1P00441 154 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 NFYAP23511 347 aaPredicted RBP13.65□□□□□ -0.22
NUP50-201ENST00000347635 SLC6A9P48067 706 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 TPMTP51580 245 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 SGCBQ16585 318 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 DEFB110Q30KQ9 67 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 MCATQ8IVS2 390 aaKnown RBP13.65□□□□□ -0.22
NUP50-201ENST00000347635 MS4A6EQ96DS6 147 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 TCTN2Q96GX1 697 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 ZC3H10Q96K80 434 aaKnown RBP13.65□□□□□ -0.22
NUP50-201ENST00000347635 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 AKR1C4P17516 323 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 CCR2P41597 374 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 CEBPGP53567 150 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 CLDN12P56749 244 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 BBS1Q8NFJ9 593 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 ALG14Q96F25 216 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 A4GNTQ9UNA3 340 aa13.65□□□□□ -0.22
NUP50-201ENST00000347635 CAPZA1P52907 286 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 PLCXD2Q0VAA5 305 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 PM20D2Q8IYS1 436 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 TEAD3Q99594 435 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 EMC3Q9P0I2 261 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 KCMF1Q9P0J7 381 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 LRIT1Q9P2V4 623 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 CHST2Q9Y4C5 530 aa13.65□□□□□ -0.23
NUP50-201ENST00000347635 SCO2O43819 266 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 RBMS2Q15434 407 aaKnown RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 NIPAL3Q6P499 406 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 GPR155Q7Z3F1 870 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 DCLRE1CQ96SD1 692 aaKnown RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 FKBP14Q9NWM8 211 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 A0A1W2PR48 441 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 ITGA5P08648 1049 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 FAM111BQ6SJ93 734 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 INTS14Q96SY0 518 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 TMEM168Q9H0V1 697 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 OR52A5Q9H2C5 316 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 NOX4Q9NPH5 578 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 KCNN3Q9UGI6 736 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 POM121CA8CG34 1229 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 ATP1B1P05026 303 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PPP3CBP16298 524 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PLEKHN1Q494U1 663 aaPredicted RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 GSG1LQ6UXU4 331 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PHB2Q99623 299 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 MKL2Q9ULH7 1088 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 TVP23AA6NH52 213 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 WRBO00258 174 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 ADPRHP54922 357 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 BTN1A1Q13410 526 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 ALKAL2Q6UX46 152 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 TMEFF1Q8IYR6 380 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 RBPMSQ93062 196 aaKnown RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 DHRS1Q96LJ7 313 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PLA2G12AQ9BZM1 189 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 PCED1AQ9H1Q7 454 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 CHMP1AQ9HD42 196 aaPredicted RBP13.64□□□□□ -0.23
NUP50-201ENST00000347635 WASH6PQ9NQA3 447 aa13.64□□□□□ -0.23
NUP50-201ENST00000347635 RAD1O60671 282 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 CTSLP07711 333 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 DLSTP36957 453 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 ELP5Q8TE02 316 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 B4GALT7Q9UBV7 327 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 TEX13DA0A0J9YY54 714 aaPredicted RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 SLC2A12Q8TD20 617 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 ATP13A2Q9NQ11 1180 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 MEGF11A6BM72 1044 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 ZNF736B4DX44 427 aaPredicted RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 M0R036 132 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 CCR9P51686 369 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 SPEM1Q8N4L4 309 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 SLC35A4Q96G79 324 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 LMF2Q9BU23 707 aaKnown RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 DKKL1Q9UK85 242 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 COPS3Q9UNS2 423 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms