RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NUMA1Q14980 2115 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 FAM183AA6NL82 134 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 LATO43561 262 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 HPP00738 406 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 CALCBP10092 127 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 GABRG2P18507 467 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 HNRNPA2B1P22626 353 aaKnown RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 RAD52P43351 418 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 PRKAG1P54619 331 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 SCRN3Q0VDG4 424 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 SLC9A5Q14940 896 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 CDK5R1Q15078 307 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 CCDC157Q569K6 752 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 RPL22L1Q6P5R6 122 aaKnown RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 UBE3DQ7Z6J8 389 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 DNAAF1Q8NEP3 725 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 OR5AR1Q8NGP9 310 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 OR1S1Q8NH92 325 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 SMPDL3BQ92485 455 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 KLK6Q92876 244 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 S100A16Q96FQ6 103 aaKnown RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 NPAS1Q99742 590 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 ACTRT3Q9BYD9 372 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 CDCP1Q9H5V8 836 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 MTHFD2LQ9H903 347 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 BEX1Q9HBH7 125 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 ADGRL4Q9HBW9 690 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 SIDT1Q9NXL6 827 aaKnown RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 SLC39A1Q9NY26 324 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 NDRG3Q9UGV2 375 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 IL20RAQ9UHF4 553 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF223Q9UK11 482 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 COPS3Q9UNS2 423 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 GPR55Q9Y2T6 319 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-202ENST00000347617 HEBP2Q9Y5Z4 205 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 C5orf42Q9H799 3197 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 ATG2BQ96BY7 2078 aa14.61□□□□□ -0.07
HMGA1-202ENST00000347617 TRAPPC13A5PLN9 417 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ANXA2P2A6NMY6 339 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 DNASE2O00115 360 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SLC31A1O15431 190 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 IFNGP01579 166 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ZGLP1P0C6A0 271 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 RPA2P15927 270 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TBXA2RP21731 343 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SLC2A5P22732 501 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ATP5A1P25705 553 aaKnown RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 GDI2P50395 445 aaKnown RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 CCR5P51681 352 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PPP2CBP62714 309 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PPP2CAP67775 309 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 FOXK2Q01167 660 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 NFATC4Q14934 902 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PUS10Q3MIT2 529 aaKnown RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PABPC1L2AQ5JQF8 200 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 HEPHL1Q6MZM0 1159 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 APOOLQ6UXV4 268 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 POMGNT2Q8NAT1 580 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 C17orf47Q8NEP4 570 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TMEM255BQ8WV15 326 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SLC38A3Q99624 504 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SEC22CQ9BRL7 303 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 MENTQ9BUN1 341 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TM7SF3Q9NS93 570 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 HPF1Q9NWY4 346 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TAS2R10Q9NYW0 307 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TAC3Q9UHF0 121 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 FLVCR2Q9UPI3 526 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF443Q9Y2A4 671 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ETV7Q9Y603 341 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TCRBV21S2A2A0A5A6 115 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 NARSO43776 548 aaKnown RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PIP5K1CO60331 668 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 FMO6PO60774 539 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PRAMEF2O60811 474 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PTP4A3O75365 173 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 THBS1P07996 1170 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 H2AFB1P0C5Y9 115 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF3P17036 446 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 MPIP34949 423 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 RORAP35398 523 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ACVR1BP36896 505 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SCAND1P57086 179 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 MLF2Q15773 248 aaPredicted RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 UAP1L1Q3KQV9 507 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 OR5M10Q6IEU7 315 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ALKAL2Q6UX46 152 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TMPRSS11FQ6ZWK6 438 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 SYT13Q7L8C5 426 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 PRSS45Q7RTY3 260 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 BMPERQ8N8U9 685 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 NUP43Q8NFH3 380 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 OR4D9Q8NGE8 314 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 OR52I2Q8NH67 350 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 HLA-CQ95604 372 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 MRPS24Q96EL2 167 aaKnown RBP14.6□□□□□ -0.07
HMGA1-202ENST00000347617 ARL6Q9H0F7 186 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 TAS2R8Q9NYW2 309 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 OPN4Q9UHM6 478 aa14.6□□□□□ -0.07
HMGA1-202ENST00000347617 GMEB2Q9UKD1 530 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms