RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 IDH3BO43837 385 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZNF354AO60765 605 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PGCP20142 388 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CXCR1P25024 350 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DUSP3P51452 185 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PSPHP78330 225 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 POU4F2Q12837 409 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CBFBQ13951 182 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DDOQ99489 341 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LPAR4Q99677 370 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SMURF1Q9HCE7 757 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 RGS5O15539 181 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CDC40O60508 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SERPINI2O75830 405 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 WISP1O95388 367 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MT-ND5P03915 603 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 FGF5P12034 268 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 P2RX1P51575 399 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZNF85Q03923 595 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 IL11RAQ14626 422 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 INSL4Q14641 139 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PON3Q15166 354 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ALG10Q5BKT4 473 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CCDC190Q86UF4 302 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MINDY2Q8NBR6 621 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NUBPLQ8TB37 319 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZPLD1Q8TCW7 415 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DUSP19Q8WTR2 217 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 C8orf44Q96CB5 159 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 Q96M85 177 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 COQ7Q99807 217 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SMOC1Q9H4F8 434 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TRIM36Q9NQ86 728 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 FBXO4Q9UKT5 387 aa12.84□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TRBV11-1A0A0K0K1C0 115 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GABRPO00591 440 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 F13BP05160 661 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SYPP08247 313 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CD14P08571 375 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GP1BBP13224 206 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 UQCRC1P31930 480 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ETV6P41212 452 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 FBXW4P57775 412 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ACTC1P68032 377 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ACTA1P68133 377 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GPR50Q13585 617 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NUP54Q7Z3B4 507 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CPEB2Q7Z5Q1 589 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 BPHLQ86WA6 291 aaPredicted RBP12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DTWD2Q8NBA8 298 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SNRNP27Q8WVK2 155 aaKnown RBP12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 C4orf36Q96KX1 117 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CEP19Q96LK0 163 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MROQ9BYG7 248 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SLC26A1Q9H2B4 701 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ABCB10Q9NRK6 738 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZMIZ1Q9ULJ6 1067 aa12.83□□□□□ -0.35
CDK5RAP1-202ENST00000346416 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SMIM30A4D0T7 59 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMEM200CA6NKL6 621 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 E9PI62 339 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ADAM10O14672 748 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RNF13O43567 381 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 UPK1BO75841 260 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TFP02787 698 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SPI1P17947 270 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TNFSF8P32971 234 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PSMD7P51665 324 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 HCCSP53701 268 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR12D2P58182 307 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CTXN1P60606 82 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 LGALS3BPQ08380 585 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 EFR3AQ14156 821 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OXA1LQ15070 435 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 QPRTQ15274 297 aa12.83□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms