RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 C11orf49Q9H6J7 331 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 B4GAT1O43505 415 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TPPPO94811 219 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 STAG3L2P0CL84 134 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SLC5A2P31639 672 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 ETV5P41161 510 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TP53I3Q53FA7 332 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 CPNE8Q86YQ8 564 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 OR10Z1Q8NGY1 313 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 CREB3L4Q8TEY5 395 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 PIRO00625 290 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 ANXA7P20073 488 aaKnown RBP18.12■□□□□ 0.49
HDAC4-201ENST00000345617 MDGA2Q7Z553 956 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SMOQ99835 787 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 EGLN3Q9H6Z9 239 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 hCG_1809904A0A1W2PP81 198 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 A0A1W2PPE2 198 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 A0A1W2PR64 198 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 A0A1W2PRV1 198 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 PLSCR5A0PG75 271 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 FPGSQ05932 587 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GPR45Q9Y5Y3 372 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 MPDZO75970 2070 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 HTR2CP28335 458 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 HTR4Q13639 388 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 UBXN2BQ14CS0 331 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 CNKSR3Q6P9H4 555 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GSX2Q9BZM3 304 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 INIPQ9NRY2 104 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 DNAJB11Q9UBS4 358 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 CSNK1G3Q9Y6M4 447 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 HAPLN1P10915 354 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 C21orf33P30042 268 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 HOXD13P35453 343 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 PIN1Q13526 163 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 TCTE3Q8IZS6 198 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 LSMEM2Q8N112 164 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF28P17035 718 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GPX3P22352 226 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GCH1P30793 250 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 APH1BQ8WW43 257 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 RBM24Q9BX46 236 aaKnown RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 SLC6A20Q9NP91 592 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 TRDV1A0A1B0GX56 115 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 CR2P20023 1033 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GDI1P31150 447 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 RPE65Q16518 533 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 ENTPD2Q9Y5L3 495 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 MGST1P10620 155 aaKnown RBP18.11■□□□□ 0.49
HDAC4-201ENST00000345617 TBPP20226 339 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 GDNFP39905 211 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 MAP4K2Q12851 820 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 Q499Y3 187 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 TXNDC8Q6A555 127 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 LETMD1Q6P1Q0 360 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 STT3BQ8TCJ2 826 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 DUSP19Q8WTR2 217 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 SPOCK3Q9BQ16 436 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 CYB5R1Q9UHQ9 305 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 F5H5K5 113 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 PXYLP1Q8TE99 480 aa18.11■□□□□ 0.49
HDAC4-201ENST00000345617 PRR11Q96HE9 360 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 FBXO8Q9NRD0 319 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 GAR1Q9NY12 217 aaKnown RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 LCN6P62502 163 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 GPR18Q14330 331 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 BTNL8Q6UX41 500 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 CDHR3Q6ZTQ4 885 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 ANGPTL6Q8NI99 470 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 TMEM18Q96B42 140 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 SMIM3Q9BZL3 60 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 MCTS1Q9ULC4 181 aaKnown RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 DOCK2Q92608 1830 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 SNRPGP62308 76 aaKnown RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 NDRG3Q9UGV2 375 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 LOC100289279A0A1B0GTE1 492 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 NAGAP17050 411 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 EEF1A2Q05639 463 aaKnown RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 OTUD1Q5VV17 481 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 CMTM2Q8TAZ6 248 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 CPNE4Q96A23 557 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 CPN1P15169 458 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 AKR1C1Q04828 323 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 PDE7AQ13946 482 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 DBX2Q6ZNG2 339 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 LMX1AQ8TE12 382 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 SLC41A2Q96JW4 573 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 GSTO2Q9H4Y5 243 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 SPTBN2O15020 2390 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 PFKMP08237 780 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 F7P08709 466 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-201ENST00000345617 ARAFP10398 606 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 RFC3P40938 356 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 HBA1P69905 142 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 NAGSQ8N159 534 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 UBXN10Q96LJ8 280 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 F2RL3Q96RI0 385 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 CD1EP15812 388 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 ENDOGQ14249 297 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms