RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GPIP06744 558 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 HOXB4P17483 251 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-202ENST00000344726 SLC6A2P23975 617 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 NR1H2P55055 460 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
HMGN3-202ENST00000344726 DMTNQ08495 405 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
HMGN3-202ENST00000344726 NCMAPQ5T1S8 102 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-202ENST00000344726 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 TSPEARQ8WU66 669 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 HSD17B8Q92506 261 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 PIGTQ969N2 578 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 PERPQ96FX8 193 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 NAA11Q9BSU3 229 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-202ENST00000344726 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
HMGN3-202ENST00000344726 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 PDLIM1O00151 329 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 TPST2O60704 377 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 MRPL33O75394 65 aaKnown RBP12.71□□□□□ -0.37
HMGN3-202ENST00000344726 ITGA5P08648 1049 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 FOSL1P15407 271 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 GUCY1A3Q02108 690 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 NFYCQ13952 458 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 STK11Q15831 433 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 SHEQ5VZ18 495 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 CASP12Q6UXS9 341 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 KRT73Q86Y46 540 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 UBE2J2Q8N2K1 259 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 LSMEM1Q8N8F7 131 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 HIPK4Q8NE63 616 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
HMGN3-202ENST00000344726 C18orf12Q96KH6 178 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 ZNF385AQ96PM9 386 aaKnown RBP12.71□□□□□ -0.37
HMGN3-202ENST00000344726 ADPRHL2Q9NX46 363 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 NPAP1Q9NZP6 1156 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 MALT1Q9UDY8 824 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 SLC9A8Q9Y2E8 581 aa12.71□□□□□ -0.37
HMGN3-202ENST00000344726 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 IGKV1D-42A0A075B6H8 117 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 A0A1B0GWA3 101 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 HS3ST1O14792 307 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 RAD51DO75771 328 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 MFN2O95140 757 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 GGT1P19440 569 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 GZMMP51124 257 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 ARFIP2P53365 341 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 FAPQ12884 760 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 PPA1Q15181 289 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 CYP51A1Q16850 503 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 TSPO2Q5TGU0 170 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 ARMC8Q8IUR7 673 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 SMYD1Q8NB12 490 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 ZNF607Q96SK3 696 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 SPATA5L1Q9BVQ7 753 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 TAPBPLQ9BX59 468 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 KAT8Q9H7Z6 458 aaKnown RBP12.7□□□□□ -0.38
HMGN3-202ENST00000344726 SAR1AQ9NR31 198 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 SLC7A10Q9NS82 523 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 ASB6Q9NWX5 421 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 ANGPT4Q9Y264 503 aa12.7□□□□□ -0.38
HMGN3-202ENST00000344726 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TRIM64BA6NI03 449 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 OR5H1A6NKK0 313 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 ELOA3DA6NLF2 546 aaPredicted RBP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 FXYD1O00168 92 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 FZD7O75084 574 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 OPN1SWP03999 348 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TROVE2P10155 538 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 RPS5P46782 204 aaKnown RBP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 PTH2RP49190 550 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 RBBP4Q09028 425 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 KLF10Q13118 480 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 GABRA6Q16445 453 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 DUSP7Q16829 419 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 ELOA3BQ3SY89 546 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 NANOGP8Q6NSW7 305 aa12.69□□□□□ -0.38
HMGN3-202ENST00000344726 YTHDF3Q7Z739 585 aaKnown RBP12.69□□□□□ -0.38
HMGN3-202ENST00000344726 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms