RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 NRG3P56975 720 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PON3Q15166 354 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF57Q68EA5 555 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PAMR1Q6UXH9 720 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 DPY19L2P2Q6ZN68 376 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 TRILQ7L0X0 811 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 C10orf53Q8N6V4 93 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 SNX33Q8WV41 574 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 DNAJA3Q96EY1 480 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF578Q96N58 590 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-201ENST00000343916 MOGAT1Q96PD6 335 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PDCD1LG2Q9BQ51 273 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 NRIP3Q9NQ35 241 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 ACOXLQ9NUZ1 547 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 PRODH2Q9UF12 536 aa17.7■□□□□ 0.42
COL9A3-201ENST00000343916 A0A0B4J203 849 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 ELOA3DA6NLF2 546 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 C17orf51A8MQB3 221 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 OR7A10O76100 309 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 PRKAR1AP10644 381 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 PSMB10P40306 273 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 AQP2P41181 271 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 SLC37A1P57057 533 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 RIN1Q13671 783 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 CLPPQ16740 277 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TATDN3Q17R31 274 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 ELOA3BQ3SY89 546 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 LRRC28Q86X40 367 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 ELOA3Q8NG57 546 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 THAP4Q8WY91 577 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 UPRTQ96BW1 309 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 SLC2A4RGQ9NR83 387 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 CYSLTR2Q9NS75 346 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 GMEB2Q9UKD1 530 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 EML5Q05BV3 1969 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 FAM240BA0A1B0GVZ2 78 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 CDC14CA4D256 554 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 NOTOA8MTQ0 251 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 IDSB3KWA1 339 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 MBTPS2O43462 519 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 OR2T7P0C7T2 308 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 SPI1P17947 270 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 CD53P19397 219 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 MST1P26927 711 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 GDI2P50395 445 aaKnown RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 UBXN2BQ14CS0 331 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TCTE1Q5JU00 501 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 ASB18Q6ZVZ8 466 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 OR2T27Q8NH04 317 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TRMT10AQ8TBZ6 339 aaKnown RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 Q96M85 177 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 HSPA12BQ96MM6 686 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TSSK2Q96PF2 358 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 NRSN2Q9GZP1 204 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 HDHD2Q9H0R4 259 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 KLHL21Q9UJP4 597 aa17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TMA7Q9Y2S6 64 aaKnown RBP17.69■□□□□ 0.42
COL9A3-201ENST00000343916 TEX13CA0A0J9YWL9 993 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 A0A1B0GVT2 93 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 H0YIG0 161 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 FAM157BP0CG42 384 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 RPS4XP62701 263 aaKnown RBP17.68■□□□□ 0.42
COL9A3-201ENST00000343916 SERTAD2Q14140 314 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 GRM7Q14831 915 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 CDK5R1Q15078 307 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 TRAM1Q15629 374 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 ZSWIM7Q19AV6 140 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 ZNF687Q8N1G0 1237 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 SLC43A2Q8N370 569 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 ORAI1Q96D31 301 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 SMIM19Q96E16 107 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 GAL3ST4Q96RP7 486 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 DDOQ99489 341 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 RTN4RQ9BZR6 473 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 UBQLN4Q9NRR5 601 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
COL9A3-201ENST00000343916 TMEM150CB9EJG8 249 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 PPM1BO75688 479 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 OR2B3O76000 313 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 YES1P07947 543 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 UBL4AP11441 157 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 PTBP1P26599 531 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL9A3-201ENST00000343916 DIO1P49895 249 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 EFNA3P52797 238 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 SIRPAP78324 504 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 GALK2Q01415 458 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 SKP2Q13309 424 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 CAMK2BQ13554 666 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 FNDC7Q5VTL7 733 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 PRR23CQ6ZRP0 262 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 PRSS58Q8IYP2 241 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 POMGNT2Q8NAT1 580 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 FAM71CQ8NEG0 241 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 MSANTD3Q96H12 275 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 OR14A2Q96R54 314 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 UBL7Q96S82 380 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-201ENST00000343916 ADOQ96SZ5 270 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 UCK1Q9HA47 277 aa17.67■□□□□ 0.42
COL9A3-201ENST00000343916 RPRD1BQ9NQG5 326 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms