RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TGIF1Q15583 401 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 VPS26BQ4G0F5 336 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 DHRS7BQ6IAN0 325 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SCYL2Q6P3W7 929 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 C3P1Q6ZMU1 363 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 AHSA2Q719I0 299 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MFSD9Q8NBP5 474 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SMPDL3AQ92484 453 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ERMAPQ96PL5 475 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 AGAP2Q99490 1192 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 C2orf88Q9BSF0 95 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SH3BP4Q9P0V3 963 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 NLKQ9UBE8 527 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ASH2LQ9UBL3 628 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 PSORS1C1Q9UIG5 152 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 GPR160Q9UJ42 338 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 DHRS7Q9Y394 339 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CLCA3PQ9Y6N3 262 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 FABP12A6NFH5 140 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 GFYI3L273 518 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TO15178 435 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TOXO94900 526 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CST1P01037 141 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ESR1P03372 595 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 FHP07954 510 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ALDOCP09972 364 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SAGP10523 405 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 RPS19P39019 145 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TAS2R50P59544 299 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 POU3F1Q03052 451 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF155Q12901 538 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 RABL3Q5HYI8 236 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 AVPI1Q5T686 147 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TSTD2Q5T7W7 516 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 KIRREL2Q6UWL6 708 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TMEM179BQ7Z7N9 219 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 KLBQ86Z14 1044 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 RNASE11Q8TAA1 199 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 GRHL3Q8TE85 626 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 APH1BQ8WW43 257 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 PIGTQ969N2 578 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SOSTQ9BQB4 213 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 RHBGQ9H310 441 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 DHX35Q9H5Z1 703 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ASB8Q9H765 288 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 IMP3Q9NV31 184 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 HRASLS2Q9NWW9 162 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 RALYQ9UKM9 306 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ASB1Q9Y576 335 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MEIKINA0A087WXM9 373 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MBD3L4A6NDZ8 208 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MBD3L3A6NE82 208 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MBD3L5A6NJ08 208 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 H7BY64 318 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SGK494L7N484 410 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 FZD7O75084 574 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ACTL6AO96019 429 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 C8GP07360 202 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CD99P14209 185 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 PVALBP20472 110 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MRPL19P49406 292 aaKnown RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 COMPP49747 757 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 NUDT6P53370 316 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 EMX2Q04743 252 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 VWA2Q5GFL6 755 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 C9orf152Q5JTZ5 239 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 FAM74A1Q5RGS3 127 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SLC30A6Q6NXT4 461 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CYHR1Q6ZMK1 362 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF367Q7RTV3 350 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SKA3Q8IX90 412 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF527Q8NB42 609 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 MBD3L2Q8NHZ7 208 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CCDC115Q96NT0 180 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SIGLEC12Q96PQ1 595 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 PITX2Q99697 317 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SOX7Q9BT81 388 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 TAPBPLQ9BX59 468 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 GPR61Q9BZJ8 451 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 BARX1Q9HBU1 254 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CHMP1AQ9HD42 196 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 GHRLQ9UBU3 117 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 ST6GALNAC2Q9UJ37 374 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 SCP2D1Q9UJQ7 156 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 NPTNQ9Y639 398 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 EML6Q6ZMW3 1958 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 SPTBN4Q9H254 2564 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 OR6C74A6NCV1 312 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 SP1P08047 785 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 HIST1H2AGP0C0S8 130 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-202ENST00000343599 ARAFP10398 606 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 HIST1H2ADP20671 130 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 IGFBP5P24593 272 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 RBBP7Q16576 425 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 GUCA2BQ16661 112 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 PYDC2Q56P42 97 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 HIST2H2AA3Q6FI13 130 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 NPNTQ6UXI9 565 aa6.67□□□□□ -1.34
ZNF540-202ENST00000343599 MARCH9Q86YJ5 346 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms