RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SPOCK1Q08629 439 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SERTAD2Q14140 314 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 OR7E24Q6IFN5 339 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PXT1Q8NFP0 134 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ADAMTS18Q8TE60 1221 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ELP4Q96EB1 424 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 C10orf90Q96M02 699 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 LPAR4Q99677 370 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ARID1BQ8NFD5 2236 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 KDM4EB2RXH2 506 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 LILRB3O75022 631 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 RBMS1P29558 406 aaKnown RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 RAP2BP61225 183 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 CSNK1G2P78368 415 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ZP2Q05996 745 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 DLX2Q07687 328 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PLK5Q496M5 336 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SSX9Q7RTT3 188 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 CD163Q86VB7 1156 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 LAS2Q8IYD9 372 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 OR5L2Q8NGL0 311 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 OR56B4Q8NH76 319 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SCARB1Q8WTV0 552 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 MYADMQ96S97 322 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 DDOQ99489 341 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ST6GALNAC5Q9BVH7 336 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 NOX3Q9HBY0 568 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 MBNL1Q9NR56 388 aaKnown RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 TAS2R8Q9NYW2 309 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 VSX1Q9NZR4 365 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SLC7A11Q9UPY5 501 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 B3GALT1Q9Y5Z6 326 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 CDHR4A6H8M9 788 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 M0R082 166 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 RFXAPO00287 272 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 FZD7O75084 574 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ACSM4P0C7M7 580 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PET100P0DJ07 73 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 MMP11P24347 488 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 OTX2P32243 289 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 IRS1P35568 1242 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SRP9P49458 86 aaKnown RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF616Q08AN1 781 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 NFATC4Q14934 902 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PYCR3Q53H96 274 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 CLLU1Q5K131 121 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 VASNQ6EMK4 673 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 TMEM81Q6P7N7 255 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PAQR6Q6TCH4 344 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SLC35D2Q76EJ3 337 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 RDH10Q8IZV5 341 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SLC16A11Q8NCK7 471 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 OR5H2Q8NGV7 314 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 PAQR8Q8TEZ7 354 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 LINC01599Q8WXQ3 324 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 TTC9Q92623 222 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 BORCS8Q96FH0 119 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 NUDT22Q9BRQ3 303 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 LMAN1LQ9HAT1 526 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 A4GALTQ9NPC4 353 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 SPATA6Q9NWH7 488 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-202ENST00000343090 CD207Q9UJ71 328 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 FBXL2Q9UKC9 423 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 TRAPPC4Q9Y296 219 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 NTNG1Q9Y2I2 539 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF337Q9Y3M9 751 aa7.49□□□□□ -1.21
UBE4B-202ENST00000343090 ZC3H12DA2A288 527 aaKnown RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 PEX14O75381 377 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 IGLV3-27P01718 113 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 APEHP13798 732 aaKnown RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 EPHA2P29317 976 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 CSNK2A1P68400 391 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 HTR4Q13639 388 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 CCINQ13939 588 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 FBXO46Q6PJ61 603 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 APOOLQ6UXV4 268 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 GDF7Q7Z4P5 450 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 CSNK2A3Q8NEV1 391 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 OR51T1Q8NGJ9 327 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 BRIX1Q8TDN6 353 aaKnown RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 GHSRQ92847 366 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 KATNB1Q9BVA0 655 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 ADAM29Q9UKF5 820 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 SCML1Q9UN30 329 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-202ENST00000343090 OR6C65A6NJZ3 312 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 ACOT7O00154 380 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 SHOXO15266 292 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 SYPP08247 313 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 FXYD4P59646 89 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 CRMP1Q14194 572 aa7.48□□□□□ -1.21
UBE4B-202ENST00000343090 RSU1Q15404 277 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms