RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TBPL1P62380 186 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 ZFP41Q8N8Y5 198 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 C20orf85Q9H1P6 137 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 EMP2P54851 167 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 DEFB134Q4QY38 66 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 LBHQ53QV2 105 aaPredicted RBP16.53■□□□□ 0.24
SMAD4-201ENST00000342988 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
SMAD4-201ENST00000342988 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMAD4-201ENST00000342988 TIMD4Q96H15 378 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 KREMEN1Q96MU8 473 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 MED18Q9BUE0 208 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 TPPP2P59282 170 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 NAT8LQ8N9F0 302 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 SFT2D1Q8WV19 159 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 DNAJC19Q96DA6 116 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 UBQLN4Q9NRR5 601 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 B4GALT5O43286 388 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 F10P00742 488 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 IL4RP24394 825 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 MMP28Q9H239 520 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
SMAD4-201ENST00000342988 CBR1P16152 277 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 THNSL2Q86YJ6 484 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 ESRP2Q9H6T0 727 aaKnown RBP16.52■□□□□ 0.24
SMAD4-201ENST00000342988 FBXO34Q9NWN3 711 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF281Q9Y2X9 895 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 TEX264Q9Y6I9 313 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 TIFABQ6ZNK6 161 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 BPIFB2Q8N4F0 458 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 ENDOVQ8N8Q3 282 aaKnown RBP16.52■□□□□ 0.24
SMAD4-201ENST00000342988 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
SMAD4-201ENST00000342988 MED16Q9Y2X0 877 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 H3BQ06 376 aaPredicted RBP16.52■□□□□ 0.24
SMAD4-201ENST00000342988 EPHA5P54756 1037 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 IGFN1Q86VF2 1251 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 WDR92Q96MX6 357 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 SLAMF7Q9NQ25 335 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 AQP7O14520 342 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 PFKMP08237 780 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 NPY1RP25929 384 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 MTCP1P56278 107 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 TMEM183BQ1AE95 376 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 RAB6CQ53S08 254 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 OR10X1Q8NGY0 326 aa16.52■□□□□ 0.24
SMAD4-201ENST00000342988 PLSCR1O15162 318 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 WNT11O96014 354 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 OR10Z1Q8NGY1 313 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 RASD2Q96D21 266 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 OR51I2Q9H344 312 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF648Q5T619 568 aaPredicted RBP16.52■□□□□ 0.23
SMAD4-201ENST00000342988 KLHDC8BQ8IXV7 354 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 KCNE4Q8WWG9 221 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 GPR52Q9Y2T5 361 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 MEIS3P1A6NDR6 274 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 GABRR3A8MPY1 467 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.23
SMAD4-201ENST00000342988 NLGN4YQ8NFZ3 816 aaPredicted RBP16.52■□□□□ 0.23
SMAD4-201ENST00000342988 MARC2Q969Z3 335 aa16.52■□□□□ 0.23
SMAD4-201ENST00000342988 NKX1-2Q9UD57 310 aaPredicted RBP16.52■□□□□ 0.23
SMAD4-201ENST00000342988 H3BML4 177 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 SLC16A7O60669 478 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 SULT1A3P0DMM9 295 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 SULT1A4P0DMN0 295 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 CD46P15529 392 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 CASP3P42574 277 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ADPRHP54922 357 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ERHP84090 104 aaKnown RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF33BQ06732 778 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 C22orf39Q6P5X5 142 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 KCNA7Q96RP8 456 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PLEKHF2Q9H8W4 249 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 TMEM200CA6NKL6 621 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 SPI1P17947 270 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 RAB1AP62820 205 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 TMEM217Q8N7C4 229 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 HAS1Q92839 578 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 FAM234AQ9H0X4 552 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 TMEM233B4DJY2 109 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 MTX2O75431 263 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 CAPNS1P04632 268 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF90Q03938 601 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 UBE3DQ7Z6J8 389 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 APH1BQ8WW43 257 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 C4orf36Q96KX1 117 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PLK3Q9H4B4 646 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ZCWPW2A0A1B0GU75 182 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PCGF2P35227 344 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 XCR1P46094 333 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 RPS5P46782 204 aaKnown RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 SLC9A3R2Q15599 337 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 NNATQ16517 81 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 BEX5Q5H9J7 111 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 CAMK2AQ9UQM7 478 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 KCNK6Q9Y257 313 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PCLAFQ15004 111 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms