RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 E2F2Q14209 437 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 GK3PQ14409 553 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 B3GNTL1Q67FW5 361 aaPredicted RBP11.78□□□□□ -0.52
LIN54-201ENST00000340417 SPINK14Q6IE38 97 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 LCN8Q6JVE9 175 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 ZFP90Q8TF47 636 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SLC35A4Q96G79 324 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 FAIMQ9NVQ4 179 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 H0YJX3 145 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 UBE2IP63279 158 aaKnown RBP11.78□□□□□ -0.52
LIN54-201ENST00000340417 PUDPQ08623 228 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 MRGPREQ86SM8 312 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 C3orf49Q96BT1 292 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SPNS1Q9H2V7 528 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 CRLF2Q9HC73 371 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
LIN54-201ENST00000340417 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 MT-ATP6P00846 226 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 CNR1P21554 472 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 MTNR1AP48039 350 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 MRGPRX4Q96LA9 322 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SDF2Q99470 211 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SCNM1Q9BWG6 230 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 LANCL2Q9NS86 450 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 SHROOM3Q8TF72 1996 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 MPPED1O15442 326 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 EML2O95834 649 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
LIN54-201ENST00000340417 COX20Q5RI15 118 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 OLIG3Q7RTU3 272 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 PCDHGA7Q9Y5G6 932 aa11.78□□□□□ -0.52
LIN54-201ENST00000340417 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 H7C1C5 153 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 J3QRK9 145 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 LCN6P62502 163 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 FGFBP1Q14512 234 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 DCAF10Q5QP82 559 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 AWAT2Q6E213 333 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 USP43Q70EL4 1123 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 RDH12Q96NR8 316 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 OR2A5Q96R48 311 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 DCAF13Q9NV06 445 aaKnown RBP11.77□□□□□ -0.52
LIN54-201ENST00000340417 OR14J1Q9UGF5 321 aa11.77□□□□□ -0.52
LIN54-201ENST00000340417 ZNF883P0CG24 379 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
LIN54-201ENST00000340417 FBXL14Q8N1E6 418 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 EXTL1Q92935 676 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 CCL21O00585 134 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 NKX2-8O15522 239 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
LIN54-201ENST00000340417 B3GNT6Q6ZMB0 384 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 PELI3Q8N2H9 469 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 POGLUT1Q8NBL1 392 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 S100ZQ8WXG8 99 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 C1orf198Q9H425 327 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 ZFP64Q9NPA5 681 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PR64 198 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 FAM172BPA6NC97 362 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 NKX6-3A6NJ46 265 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 HNRNPCP07910 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
LIN54-201ENST00000340417 GABRA1P14867 456 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 TMEM236Q5W0B7 351 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
LIN54-201ENST00000340417 PSME4Q14997 1843 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 ZNF236Q9UL36 1845 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 MAS1P04201 325 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 DCKP27707 260 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 CEACAM19Q7Z692 300 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 OR10G3Q8NGC4 313 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 EID2BQ96D98 161 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 CPPED1Q9BRF8 314 aaPredicted RBP11.77□□□□□ -0.53
LIN54-201ENST00000340417 CHST11Q9NPF2 352 aa11.77□□□□□ -0.53
LIN54-201ENST00000340417 TET1Q8NFU7 2136 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 BTBD17A6NE02 478 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 FZD7O75084 574 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 HPRP00739 348 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 GYPBP06028 91 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 HLCSP50747 726 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 CDC20Q12834 499 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 MKXQ8IYA7 352 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 DNAJC22Q8N4W6 341 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
LIN54-201ENST00000340417 ISL2Q96A47 359 aa11.76□□□□□ -0.53
LIN54-201ENST00000340417 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms