RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ZNF724A8MTY0 619 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 CHP2O43745 196 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF682O95780 498 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 SERPINA1P01009 418 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 CALB2P22676 271 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 FAM27E3Q08E93 113 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 PDK3Q15120 406 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 EXOC3L2Q2M3D2 409 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 SAMD4BQ5PRF9 694 aaKnown RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 SWT1Q5T5J6 900 aaKnown RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 GLYATQ6IB77 296 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 LINC00114Q6XXX2 140 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 DEF8Q6ZN54 512 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 CBLL1Q75N03 491 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 KIF18BQ86Y91 864 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 TMEM99Q8N816 258 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 MFSD8Q8NHS3 518 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 TAAR8Q969N4 342 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 SLC25A36Q96CQ1 311 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 CD300AQ9UGN4 299 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 SLC7A7Q9UM01 511 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
UBE3B-201ENST00000340074 IGKV3D-15A0A087WSY6 115 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 TRAPPC13A5PLN9 417 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 CYSRT1A8MQ03 144 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 FTCDNL1E5RQL4 147 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 LYPD3O95274 346 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 HSD17B1P14061 328 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 PRF1P14222 555 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 POU2F1P14859 743 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 MSX2P35548 267 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-201ENST00000340074 SLC16A1P53985 500 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 SORDQ00796 357 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 C5orf46Q6UWT4 87 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 WDR88Q6ZMY6 472 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 RINLQ6ZS11 566 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 TRPM8Q7Z2W7 1104 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 RBM15BQ8NDT2 890 aaKnown RBP13.55□□□□□ -0.24
UBE3B-201ENST00000340074 TMEM43Q9BTV4 400 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 ELOVL5Q9NYP7 299 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 EMC3Q9P0I2 261 aa13.55□□□□□ -0.24
UBE3B-201ENST00000340074 TACC2O95359 2948 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 TRAV36DV7A0A075B6V5 113 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 TUBAL3A6NHL2 446 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 AQP7P3A6NL99 342 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 CBLP22681 906 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 CD79BP40259 229 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 PEX19P40855 299 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 KIR2DL3P43628 341 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 P2RY4P51582 365 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 TAS2R41P59536 307 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 PIN1Q13526 163 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-201ENST00000340074 FAM69AQ5T7M9 428 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 TMEM225Q6GV28 225 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 TFAP2EQ6VUC0 442 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.54□□□□□ -0.24
UBE3B-201ENST00000340074 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF295-AS1Q8N0V1 137 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 LINC01560Q8TB33 94 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 EPYCQ99645 322 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 AMBRA1Q9C0C7 1298 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 CRIM1Q9NZV1 1036 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 NOSIPQ9Y314 301 aaKnown RBP13.54□□□□□ -0.24
UBE3B-201ENST00000340074 APCP25054 2843 aa13.54□□□□□ -0.24
UBE3B-201ENST00000340074 OR2T1O43869 369 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 GMNNO75496 209 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 EDNRAP25101 427 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
UBE3B-201ENST00000340074 NTF4P34130 210 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 UGT2B10P36537 528 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 FXNQ16595 210 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 GPAT4Q86UL3 456 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
UBE3B-201ENST00000340074 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 PRSS27Q9BQR3 290 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 SLC24A3Q9HC58 644 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 KCNN3Q9UGI6 736 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 SNX13Q9Y5W8 968 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 FLVCR1Q9Y5Y0 555 aa13.53□□□□□ -0.24
UBE3B-201ENST00000340074 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
UBE3B-201ENST00000340074 GPR171O14626 319 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 FZD7O75084 574 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 OR5F1O95221 314 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 IFNW1P05000 195 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 GRPRP30550 384 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 OR3A2P47893 321 aa13.52□□□□□ -0.25
UBE3B-201ENST00000340074 PCYT1AP49585 367 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms