RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ARID1BQ8NFD5 2236 aaPredicted RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 A0A0B4J203 849 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 A0A0G2JK05 382 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 RGS13O14921 159 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 NDUFB2O95178 105 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 IFNA16P05015 189 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 ALAS2P22557 587 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 MLLT3P42568 568 aaPredicted RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 RNASE12Q5GAN4 147 aaKnown RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 DMKNQ6E0U4 476 aaPredicted RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 LYPD4Q6UWN0 246 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 LINC00114Q6XXX2 140 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 ZNF550Q7Z398 422 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 DUSP18Q8NEJ0 188 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 ZPLD1Q8TCW7 415 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 CLIP3Q96DZ5 547 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 SGTBQ96EQ0 304 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 MMABQ96EY8 250 aaPredicted RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 NMNAT3Q96T66 252 aa14.93□□□□□ -0.02
LITAF-201ENST00000339430 MKKSQ9NPJ1 570 aaPredicted RBP14.93□□□□□ -0.02
LITAF-201ENST00000339430 CTNSO60931 367 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 AGFG1P52594 562 aaKnown RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 ATP12AP54707 1039 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 TAS2R43P59537 309 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 ACTC1P68032 377 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 ACTA1P68133 377 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 PRTGQ2VWP7 1150 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 CCDC92Q53HC0 331 aaPredicted RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 NKAIN2Q5VXU1 208 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 NOXA1Q86UR1 476 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 GPR135Q8IZ08 494 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 BCORP1Q8N888 145 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 SAP25Q8TEE9 199 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 RNF170Q96K19 258 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 HAO2Q9NYQ3 351 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 ST6GALNAC2Q9UJ37 374 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 MRPS33Q9Y291 106 aaKnown RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 PCDH15Q96QU1 1955 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 FAM172BPA6NC97 362 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 OR6C70A6NIJ9 312 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 EEF1E1O43324 174 aaKnown RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 PRAMEF2O60811 474 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 IFI6P09912 130 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 CLDN20P56880 219 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 NRG3P56975 720 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 CDK10Q15131 360 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 TRAM1Q15629 374 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 ZNF141Q15928 474 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 C6orf183Q5T699 404 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 KANSL1Q7Z3B3 1105 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 C7orf57Q8NEG2 295 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 OR5H6Q8NGV6 325 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 CEP76Q8TAP6 659 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 RASD2Q96D21 266 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 TMEM246Q9BRR3 403 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 THAP7Q9BT49 309 aaPredicted RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 OR10A5Q9H207 317 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 SERTAD3Q9UJW9 196 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 GNG8Q9UK08 70 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 TMEM184BQ9Y519 407 aaPredicted RBP14.92□□□□□ -0.02
LITAF-201ENST00000339430 CLDN16Q9Y5I7 305 aa14.92□□□□□ -0.02
LITAF-201ENST00000339430 C4orf47A7E2U8 309 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 FAM47E-STBD1D6RA91 191 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 NPIPB9F8W1W9 429 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 PSMD9O00233 223 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 NUDT21O43809 227 aaKnown RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 SELENOFO60613 162 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 SC5DO75845 299 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 RAB3BP20337 219 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 HLA-DMAP28067 261 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 PSMB10P40306 273 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 GPR3P46089 330 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 OR1D5P58170 312 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 PXKQ7Z7A4 578 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 YIPF7Q8N8F6 280 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 OR6K6Q8NGW6 343 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 THAP4Q8WY91 577 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 PELI1Q96FA3 418 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 UBL7Q96S82 380 aaPredicted RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 CNN2Q99439 309 aaKnown RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 SMOC1Q9H4F8 434 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 SERINC4A6NH21 518 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 FAM171A2A8MVW0 826 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 GRPRP30550 384 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 PITPNBP48739 271 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 SRP9P49458 86 aaKnown RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 GDI2P50395 445 aaKnown RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 ERVK-25P63136 954 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 POU4F2Q12837 409 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 GPR176Q14439 515 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 RABEPKQ7Z6M1 372 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 SLC35F2Q8IXU6 374 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 ASCC1Q8N9N2 400 aaKnown RBP14.91□□□□□ -0.02
LITAF-201ENST00000339430 SLC2A12Q8TD20 617 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 SNX33Q8WV41 574 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 RFT1Q96AA3 541 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 ABHD1Q96SE0 405 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 G6PC3Q9BUM1 346 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 GMEB2Q9UKD1 530 aa14.91□□□□□ -0.02
LITAF-201ENST00000339430 MAU2Q9Y6X3 613 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms