RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 LARS2Q15031 903 aaKnown RBP17.05■□□□□ 0.32
ITGA4-202ENST00000339307 SLC9B1Q4ZJI4 515 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 PDCD4Q53EL6 469 aaKnown RBP17.05■□□□□ 0.32
ITGA4-202ENST00000339307 WBP2NLQ6ICG8 309 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 WDR31Q8NA23 367 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 OR9K2Q8NGE7 335 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 AURKBQ96GD4 344 aaPredicted RBP17.05■□□□□ 0.32
ITGA4-202ENST00000339307 ITCHQ96J02 903 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 ADAM19Q9H013 955 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 MANSC1Q9H8J5 431 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 TPT1P8Q9HAU6 139 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 SLC17A5Q9NRA2 495 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 DCTN4Q9UJW0 460 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 ZNF443Q9Y2A4 671 aaPredicted RBP17.05■□□□□ 0.32
ITGA4-202ENST00000339307 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
ITGA4-202ENST00000339307 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 LIPT2A6NK58 231 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 KLF11O14901 512 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 UBDO15205 165 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 SNNO75324 88 aaPredicted RBP17.04■□□□□ 0.32
ITGA4-202ENST00000339307 PRPS1P60891 318 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 TTMPQ5BVD1 217 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 B3GLCTQ6Y288 498 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 C17orf78Q8N4C9 275 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 SLC38A5Q8WUX1 472 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 ZNF385AQ96PM9 386 aaKnown RBP17.04■□□□□ 0.32
ITGA4-202ENST00000339307 ARMC7Q9H6L4 198 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 IGHV4-30-2A0A087WSY4 118 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 CD5LO43866 347 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 WNT11O96014 354 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 BMP4P12644 408 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 MPGP29372 298 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
ITGA4-202ENST00000339307 MAPK11Q15759 364 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 GTDC1Q4AE62 458 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 CLIP4Q8N3C7 705 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 C1orf162Q8NEQ5 155 aaPredicted RBP17.04■□□□□ 0.32
ITGA4-202ENST00000339307 VPS33AQ96AX1 596 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 SLC25A36Q96CQ1 311 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 TMEM19Q96HH6 336 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 SF3B5Q9BWJ5 86 aaKnown RBP17.04■□□□□ 0.32
ITGA4-202ENST00000339307 MED4Q9NPJ6 270 aa17.04■□□□□ 0.32
ITGA4-202ENST00000339307 AQP7P3A6NL99 342 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 A8MVM7 634 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 PDLIM1O00151 329 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
ITGA4-202ENST00000339307 GPRIN2O60269 458 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 TFPTP0C1Z6 253 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 PRG2P13727 222 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 ACAA2P42765 397 aaKnown RBP17.03■□□□□ 0.32
ITGA4-202ENST00000339307 SLC25A3Q00325 362 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 CHRNB3Q05901 458 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 HIKESHIQ53FT3 197 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 HSP90B2PQ58FF3 399 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 ZNF311Q5JNZ3 666 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 ZNF544Q6NX49 715 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 ABHD12BQ7Z5M8 362 aaPredicted RBP17.03■□□□□ 0.32
ITGA4-202ENST00000339307 POMGNT2Q8NAT1 580 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 OR9I1Q8NGQ6 314 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 TMEM45BQ96B21 275 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 ZIM2Q9NZV7 527 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 MOKQ9UQ07 419 aa17.03■□□□□ 0.32
ITGA4-202ENST00000339307 CR1P17927 2039 aa17.02■□□□□ 0.32
ITGA4-202ENST00000339307 CHD3Q12873 2000 aaKnown RBP17.02■□□□□ 0.32
ITGA4-202ENST00000339307 A0A0G2JPF8 293 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 HNRNPCL3B7ZW38 293 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 ATP6V1G2-DDX39BF2Z307 99 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 HNRNPCL1O60812 293 aaKnown RBP17.02■□□□□ 0.31
ITGA4-202ENST00000339307 THBS1P07996 1170 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 HNRNPCL4P0DMR1 293 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 MVDP53602 400 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 DSCR9P59020 149 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 C1orf140Q5VVS0 124 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 PRAMEF8Q5VWM4 474 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 PRAMEF7Q5VXH5 474 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 C11orf71Q6IPW1 123 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 HMBOX1Q6NT76 420 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 DNM1P46Q6ZS02 220 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 SERPINA11Q86U17 422 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 MIER2Q8N344 545 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 ZNF525Q8N782 197 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 ZIC4Q8N9L1 334 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 OR52B2Q96RD2 323 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 KCNS3Q9BQ31 491 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 TMEM45AQ9NWC5 275 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 THUMPD1Q9NXG2 353 aaKnown RBP17.02■□□□□ 0.31
ITGA4-202ENST00000339307 PMF1-BGLAPU3KQ54 211 aa17.02■□□□□ 0.31
ITGA4-202ENST00000339307 C5orf58C9J3I9 102 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 ZCCHC18P0CG32 403 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 GTF2E2P29084 291 aaKnown RBP17.01■□□□□ 0.31
ITGA4-202ENST00000339307 APOBEC3AP31941 199 aaPredicted RBP17.01■□□□□ 0.31
ITGA4-202ENST00000339307 UBE2NP61088 152 aaKnown RBP17.01■□□□□ 0.31
ITGA4-202ENST00000339307 HOXC5Q00444 222 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 LGALS3BPQ08380 585 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 RNF220Q5VTB9 566 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 NIPAL3Q6P499 406 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 FAM168AQ92567 244 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 FBXO17Q96EF6 278 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 MAELQ96JY0 434 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms