RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FLVCR1Q9Y5Y0 555 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 GPR45Q9Y5Y3 372 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 HIVEP2P31629 2446 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CDHR4A6H8M9 788 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 A8MVM7 634 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 CD5LO43866 347 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 C1QCP02747 245 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 GKN3PP0CG01 181 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 CDH2P19022 906 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-202ENST00000337571 MPGP29372 298 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 IL12AP29459 219 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 NTF4P34130 210 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 CRISP3P54108 245 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 DSTNP60981 165 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 SLC17A1Q14916 467 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 OR7A5Q15622 319 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 TNFAIP8L3Q5GJ75 292 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 TSPO2Q5TGU0 170 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF544Q6NX49 715 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 POMGNT2Q8NAT1 580 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 OR9K2Q8NGE7 335 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 MDFIQ99750 246 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 KCNS3Q9BQ31 491 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 HEATR1Q9H583 2144 aaKnown RBP9.36□□□□□ -0.91
CAPN3-202ENST00000337571 PIF1Q9H611 641 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 SLC17A5Q9NRA2 495 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 SLC7A10Q9NS82 523 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 RLIMQ9NVW2 624 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM45AQ9NWC5 275 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 ADPRHL2Q9NX46 363 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
CAPN3-202ENST00000337571 CHD3Q12873 2000 aaKnown RBP9.36□□□□□ -0.91
CAPN3-202ENST00000337571 A0A0G2JPF8 293 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM120BA0PK00 339 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 ZC3H12DA2A288 527 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 HNRNPCL3B7ZW38 293 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 HNRNPCL1O60812 293 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 AKR7A3O95154 331 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 VAMP5O95183 116 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 BCHEP06276 602 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 ITGA5P08648 1049 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 TFPTP0C1Z6 253 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 HNRNPCL4P0DMR1 293 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 ETFAP13804 333 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 RPS4Y1P22090 263 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 PAX7P23759 505 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 GTF2E2P29084 291 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 APOBEC3AP31941 199 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 IRX1P78414 480 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 PDCD4Q53EL6 469 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 C6orf10Q5SRN2 563 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 HMBOX1Q6NT76 420 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 PODNL1Q6PEZ8 512 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 DNM1P46Q6ZS02 220 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 VRK2Q86Y07 508 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM99Q8N816 258 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 SLC38A5Q8WUX1 472 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM45BQ96B21 275 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 AURKBQ96GD4 344 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 TPT1P8Q9HAU6 139 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 ADAM21Q9UKJ8 722 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 RAB21Q9UL25 225 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 IFT52Q9Y366 437 aa9.35□□□□□ -0.91
CAPN3-202ENST00000337571 FN1P02751 2386 aaKnown RBP9.35□□□□□ -0.91
CAPN3-202ENST00000337571 A0A096LPI6 279 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 OR6C65A6NJZ3 312 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 AQP7P3A6NL99 342 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 A8MV72 311 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 C5orf58C9J3I9 102 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF587BE7ETH6 402 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 PDLIM1O00151 329 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 UBDO15205 165 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 SNNO75324 88 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 THBS1P07996 1170 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZCCHC18P0CG32 403 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 SLC25A16P16260 332 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 POLR2JP52435 117 aaKnown RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 SLC18A1P54219 525 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 FOXG1P55316 489 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 UBE2NP61088 152 aaKnown RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 PLAURQ03405 335 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 SPOCK1Q08629 439 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 BNIP2Q12982 314 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF311Q5JNZ3 666 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 PRAMEF8Q5VWM4 474 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 PRAMEF7Q5VXH5 474 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF836Q6ZNA1 936 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 MSANTD1Q6ZTZ1 278 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 HIPK1Q86Z02 1210 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 MIER2Q8N344 545 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 FAM168AQ92567 244 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms