RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 WNT2BQ93097 391 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 ALPK1Q96QP1 1244 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 TTYH2Q9BSA4 534 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 NAA11Q9BSU3 229 aaPredicted RBP12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 FUZQ9BT04 418 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 KLHL4Q9C0H6 718 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 REEP1Q9H902 201 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 VNN3Q9NY84 501 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMCC3Q9ULS5 477 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 LYVE1Q9Y5Y7 322 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 KIAA1549Q9HCM3 1950 aa12.6□□□□□ -0.39
APOBEC3B-202ENST00000335760 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 DNPH1O43598 174 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 ENTPD5O75356 428 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 AQP8O94778 261 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 AKR7A3O95154 331 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 CH25HO95992 272 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 IFI30P13284 250 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 GRPRP30550 384 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 PPP1R8Q12972 351 aaKnown RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 SEC23BQ15437 767 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 ZNF74Q16587 644 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 EXOC3L2Q2M3D2 409 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMEM211Q6ICI0 200 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 NRMQ8IXM6 262 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 MARVELD2Q8N4S9 558 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 MOGAT1Q96PD6 335 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 DMRTA2Q96SC8 542 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 C20orf141Q9NUB4 165 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 C6orf203Q9P0P8 240 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 SAMHD1Q9Y3Z3 626 aaKnown RBP12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 U3KQV3 271 aa12.59□□□□□ -0.39
APOBEC3B-202ENST00000335760 MBD3L4A6NDZ8 208 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 MBD3L3A6NE82 208 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 MBD3L5A6NJ08 208 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 SMAD9O15198 467 aaKnown RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR7A10O76100 309 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 FCGR2AP12318 317 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 LIMS1P48059 325 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 HMGA2P52926 109 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 NUP107P57740 925 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 PRKCDQ05655 676 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 MFSD13AQ14CX5 517 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 OTUD3Q5T2D3 398 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 PAQR6Q6TCH4 344 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 MAMDC2Q7Z304 686 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC46A3Q7Z3Q1 461 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 CCDC103Q8IW40 242 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 CDK20Q8IZL9 346 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 TMEM99Q8N816 258 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR4K5Q8NGD3 323 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 OR4C15Q8NGM1 316 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 MBD3L2Q8NHZ7 208 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 TM9SF2Q99805 663 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ASPNQ9BXN1 380 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 FKRPQ9H9S5 495 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 DNAJB9Q9UBS3 223 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ARHGAP21Q5T5U3 1957 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ZNF462Q96JM2 2506 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
APOBEC3B-202ENST00000335760 J3QKU1 62 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 M0R082 166 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CLOCKO15516 846 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CYTIPO60759 359 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 TOXO94900 526 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CCNB2O95067 398 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 RCBTB2O95199 551 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 MT-ATP6P00846 226 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 LDLRP01130 860 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 IGF2P01344 180 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 IL2RAP01589 272 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 FCGR1AP12314 374 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 FUT1P19526 365 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 TIMP3P35625 211 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 IST1P53990 364 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 CTBP2P56545 445 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 PER3P56645 1201 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 H3F3AP84243 136 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 MCEMP1Q8IX19 187 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 SLC43A2Q8N370 569 aa12.57□□□□□ -0.4
APOBEC3B-202ENST00000335760 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms