RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DPH1Q9BZG8 443 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 ALKBH4Q9NXW9 302 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.67
HDAC6-201ENST00000334136 IGHV5-10-1A0A0J9YXX1 117 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SSX4O60224 188 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 AK1P00568 194 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 CCL4P13236 92 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 ICAM2P13598 275 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 BSGP35613 385 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 DLSTP36957 453 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 TAS2R43P59537 309 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 ILKQ13418 452 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SEC23BQ15437 767 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 HAGHLQ6PII5 290 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OR52R1Q8NGF1 315 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OR8J2Q8NGG1 315 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 FAM131CQ96AQ9 280 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 WDR34Q96EX3 536 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 PRRG4Q9BZD6 226 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 BCL2L14Q9BZR8 327 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 F5H0A9 414 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 LRP3O75074 770 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SLC35E2P0CK97 266 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 KLHL26Q53HC5 615 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 PYHIN1Q6K0P9 492 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 GATSQ8NAP1 163 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OR4K13Q8NH42 304 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OR14A16Q8NHC5 309 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SNIP1Q8TAD8 396 aaKnown RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SMPDL3BQ92485 455 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 C7orf34Q96L11 122 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OSGIN1Q9UJX0 560 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 DCDC2BA2VCK2 349 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 FAM171A2A8MVW0 826 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 P2RX6O15547 441 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SCO2O43819 266 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 TACSTD2P09758 323 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 RUNX2Q13950 521 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 VN1R4Q7Z5H5 301 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 RBM45Q8IUH3 476 aaKnown RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 CCDC107Q8WV48 283 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 C5orf34Q96MH7 638 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 TREX2Q9BQ50 279 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 METTL17Q9H7H0 456 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OR2S2Q9NQN1 319 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 CENPMQ9NSP4 180 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 OCIAD1Q9NX40 245 aa10.89□□□□□ -0.67
HDAC6-201ENST00000334136 TRBV11-1A0A0K0K1C0 115 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ARPC1BO15143 372 aaKnown RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 TRAPPC6AO75865 159 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PDGFAP04085 211 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 HRGP04196 525 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 FTH1P19P0C7X4 201 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PTPN6P29350 595 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 FAM198BQ6UWH4 519 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GLCCI1Q86VQ1 547 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GPALPP1Q8IXQ4 340 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 THAP6Q8TBB0 222 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 DIO2Q92813 273 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PSD2Q9BQI7 771 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ACTR6Q9GZN1 396 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 TWSG1Q9GZX9 223 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PTGES2Q9H7Z7 377 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 SYNPO2LQ9H987 977 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 IFT46Q9NQC8 304 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 KCMF1Q9P0J7 381 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 A3GALT2U3KPV4 340 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 KCNE1BA0A087WTH5 132 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 CDC14CA4D256 554 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 A8MVJ9 347 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GABRPO00591 440 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GDF9O60383 454 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GP1BAP07359 652 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 DDOSTP39656 456 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 FXYD6P3P58550 94 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 GRK1Q15835 563 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ZNF750Q32MQ0 723 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PRSS42Q7Z5A4 293 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 CA13Q8N1Q1 262 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 D2HGDHQ8N465 521 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 TRIM2Q9C040 744 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PIGUQ9H490 435 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
HDAC6-201ENST00000334136 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 PTH2RP49190 550 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 RAB40BQ12829 278 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 LTB4RQ15722 352 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 ALKAL2Q6UX46 152 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 OR10H5Q8NGA6 315 aa10.88□□□□□ -0.67
HDAC6-201ENST00000334136 OR52E2Q8NGJ4 325 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms