RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ZNF136P52737 540 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 B2MP61769 119 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 PRSS45Q7RTY3 260 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 GATSQ8NAP1 163 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 MOSPD2Q8NHP6 518 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 NT5CQ8TCD5 201 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 KIF25Q9UIL4 384 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 SYT5O00445 386 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 FZD7O75084 574 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 GPR75O95800 540 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 E2F1Q01094 437 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 EIF2B5Q13144 721 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 TCTE1Q5JU00 501 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 RASSF6Q6ZTQ3 369 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 LILRB1Q8NHL6 650 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 COQ8AQ8NI60 647 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 IFT27Q9BW83 186 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 OR52D1Q9H346 318 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ZMAT5Q9UDW3 170 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 CBLCQ9ULV8 474 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 LRRN3E7EW58 273 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 NMBP08949 121 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 NPR2P20594 1047 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 BTG2P78543 158 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 CD300LDQ6UXZ3 194 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF620Q6ZNG0 422 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 USP53Q70EK8 1073 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 RANBP3LQ86VV4 465 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 OR2T33Q8NG76 320 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 FANK1Q8TC84 345 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 FAM131CQ96AQ9 280 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ERMAPQ96PL5 475 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 SPRTNQ9H040 489 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 UBQLN3Q9H347 655 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 LRRN3Q9H3W5 708 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 PCOLCE2Q9UKZ9 415 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 DTX4Q9Y2E6 619 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 KDM4EB2RXH2 506 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 SURF4O15260 269 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 CHST10O43529 356 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 RBMS1P29558 406 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 STX4Q12846 297 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 CEBPEQ15744 281 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 PGGHGQ32M88 737 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 HEPHL1Q6MZM0 1159 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ALKAL2Q6UX46 152 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 THSD4Q6ZMP0 1018 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 C3P1Q6ZMU1 363 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 C17orf107Q6ZR85 190 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 SIRT6Q8N6T7 355 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 POGLUT1Q8NBL1 392 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 OR4D9Q8NGE8 314 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 PIGKQ92643 395 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 OSTF1Q92882 214 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 GSDMCQ9BYG8 508 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 ZCCHC4Q9H5U6 513 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 FBXL2Q9UKC9 423 aa14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 C19orf53Q9UNZ5 99 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-201ENST00000319854 CYR61O00622 381 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 MAGEB4O15481 346 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 RNF13O43567 381 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 GALR3O60755 368 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 GATBO75879 557 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 SMIM10L1P0DMW3 83 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 NOS3P29474 1203 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 SFRP4Q6FHJ7 346 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 CA13Q8N1Q1 262 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF619Q8N2I2 560 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 UXS1Q8NBZ7 420 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 OR10H4Q8NGA5 316 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 TRMT10AQ8TBZ6 339 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ZDHHC1Q8WTX9 485 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 SMIM10Q96HG1 83 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 LDAHQ9H6V9 325 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 NPTNQ9Y639 398 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 A0A0J9YY10 115 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ADAM11O75078 769 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 GAAP10253 952 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 MAOAP21397 527 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 MRPS21P82921 87 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 FZD2Q14332 565 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 TMEM255AQ5JRV8 349 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 SFXN4Q6P4A7 337 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF322Q6U7Q0 402 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 KLHL36Q8N4N3 616 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 LINC00471Q8N535 108 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 OR51Q1Q8NH59 317 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 TMEM239Q8WW34 195 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ELMOD3Q96FG2 381 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 RADILQ96JH8 1075 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 MAP3K3Q99759 626 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ORAI3Q9BRQ5 295 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 ASB6Q9NWX5 421 aa14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 SIDT1Q9NXL6 827 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-201ENST00000319854 RP1P56715 2156 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms