RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 CDRT15Q96T59 188 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 AMBRA1Q9C0C7 1298 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 RPS6KB2Q9UBS0 482 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 HDGFL3Q9Y3E1 203 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SPG11Q96JI7 2443 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 ABCA4P78363 2273 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 A0A087WUJ7 227 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 TUBAL3A6NHL2 446 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PIP5K1CO60331 668 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 LYZL6O75951 148 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 HPRP00739 348 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 THBDP07204 575 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 CD8BP10966 210 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 FCGR2AP12318 317 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 POU2F1P14859 743 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 UGT2B10P36537 528 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 HTR3AP46098 478 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 VEZF1Q14119 521 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SLC17A1Q14916 467 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 TMEM201Q5SNT2 666 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 GKAP1Q5VSY0 366 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 OR6K3Q8NGY3 331 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 ZFP3Q96NJ6 502 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 HOPXQ9BPY8 73 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 KCTD14Q9BQ13 255 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 BCO1Q9HAY6 547 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 MEPEQ9NQ76 525 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 TIGARQ9NQ88 270 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 C20orf141Q9NUB4 165 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 B3GAT1Q9P2W7 334 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 TESQ9UGI8 421 aaKnown RBP10.67□□□□□ -0.7
SCFD1-201ENST00000311943 SLC13A4Q9UKG4 626 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 EMC9Q9Y3B6 208 aa10.67□□□□□ -0.7
SCFD1-201ENST00000311943 M0R082 166 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 SERPINI2O75830 405 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ADAP00813 363 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 UQCRBP14927 111 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 CD79BP40259 229 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 NCALDP61601 193 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 CSNK2A1P68400 391 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ULK3Q6PHR2 472 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 HACD2Q6Y1H2 254 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 LINGO2Q7L985 606 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 GABRG1Q8N1C3 465 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ANKS4BQ8N8V4 417 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF417Q8TAU3 575 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF587Q96SQ5 575 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF559Q9BR84 538 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 ARMC7Q9H6L4 198 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 TMEM27Q9HBJ8 222 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 HHATLQ9HCP6 504 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 FLVCR1Q9Y5Y0 555 aa10.66□□□□□ -0.7
SCFD1-201ENST00000311943 B2RBV5 119 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 NDUFAB1O14561 156 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 PDE5AO76074 875 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 CRHP06850 196 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 IGHV1-2P23083 117 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 PRDX6P30041 224 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 GRPRP30550 384 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SELENOPP49908 381 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 ERFP50548 548 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 UGT2B15P54855 530 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SELENOWP63302 87 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 DBPQ10586 325 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-201ENST00000311943 INTS11Q5TA45 600 aaKnown RBP10.65□□□□□ -0.7
SCFD1-201ENST00000311943 GLYATQ6IB77 296 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 C6orf89Q6UWU4 347 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 LINC00114Q6XXX2 140 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 EPHX4Q8IUS5 362 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 ZNF837Q96EG3 531 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-201ENST00000311943 HSH2DQ96JZ2 352 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 EMC6Q9BV81 110 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 POTEKPQ9BYX7 375 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 TRIM2Q9C040 744 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 PIGMQ9H3S5 423 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SPAG4Q9NPE6 437 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SLC7A10Q9NS82 523 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 KLHL9Q9P2J3 617 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 CD300AQ9UGN4 299 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 A4GNTQ9UNA3 340 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SPIN1Q9Y657 262 aaPredicted RBP10.65□□□□□ -0.7
SCFD1-201ENST00000311943 AKAP9Q99996 3911 aa10.65□□□□□ -0.7
SCFD1-201ENST00000311943 SH3D21A4FU49 640 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 MS4A18H0YCH9 400 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 GSTA4O15217 222 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 DCTN3O75935 186 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 CDH2P19022 906 aaPredicted RBP10.65□□□□□ -0.71
SCFD1-201ENST00000311943 GGT1P19440 569 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 MXRA7P84157 204 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 RNPS1Q15287 305 aaKnown RBP10.65□□□□□ -0.71
SCFD1-201ENST00000311943 MS4A18Q3C1V0 323 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 TSPO2Q5TGU0 170 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 ERICH5Q6P6B1 374 aa10.65□□□□□ -0.71
SCFD1-201ENST00000311943 TBPL2Q6SJ96 375 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms