RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC25A36Q96CQ1 311 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 THAP7Q9BT49 309 aaPredicted RBP10.57□□□□□ -0.72
PTPN2-201ENST00000309660 CLDN16Q9Y5I7 305 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 ALG5Q9Y673 324 aa10.57□□□□□ -0.72
PTPN2-201ENST00000309660 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 C11orf98E9PRG8 122 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 UBL4AP11441 157 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SOX2P48431 317 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 IFITM2Q01629 132 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 BDH1Q02338 343 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 FHL1Q13642 323 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 GRM7Q14831 915 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SYT13Q7L8C5 426 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 KIAA1143Q96AT1 154 aaPredicted RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 UPRTQ96BW1 309 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PGLYRP3Q96LB9 341 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ORAI3Q9BRQ5 295 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF426Q9BUY5 554 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 INPP5EQ9NRR6 644 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 CUTCQ9NTM9 273 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PRODH2Q9UF12 536 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PLGP00747 810 aaPredicted RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SPI1P17947 270 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PSMD4P55036 377 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 CLDN12P56749 244 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 HSD17B7P56937 341 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SIRPAP78324 504 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 HLA-DQA1Q5Y7H0 255 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 RDH10Q8IZV5 341 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ARHGEF39Q8N4T4 335 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 GDF15Q99988 308 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 TWSG1Q9GZX9 223 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 MOV10Q9HCE1 1003 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SLC2A4RGQ9NR83 387 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 A0A087WV48 116 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 EFCAB7A8K855 629 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 FLRT2O43155 660 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 AHCYP23526 432 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 CFL1P23528 166 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 RPS5P46782 204 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 FASLGP48023 281 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PITPNBP48739 271 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 NR0B1P51843 470 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 NRG3P56975 720 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 NSDHLQ15738 373 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 HES5Q5TA89 166 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 LRRC28Q86X40 367 aaPredicted RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF615Q8N8J6 731 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF527Q8NB42 609 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 GALNT6Q8NCL4 622 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ACOT12Q8WYK0 555 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PMM1Q92871 262 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 ABHD1Q96SE0 405 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 SYNDIG1Q9H7V2 258 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 UBQLN4Q9NRR5 601 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 MRPL15Q9P015 296 aaKnown RBP10.56□□□□□ -0.72
PTPN2-201ENST00000309660 GTF2A1LQ9UNN4 478 aa10.56□□□□□ -0.72
PTPN2-201ENST00000309660 TMEM72A0PK05 275 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 TLCD2A6NGC4 264 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF749O43361 778 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 FZD7O75084 574 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 UTS2O95399 124 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 OR8G3PP0DMU2 310 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 CD27P26842 260 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 POU4F2Q12837 409 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ALG10Q5BKT4 473 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 DMKNQ6E0U4 476 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 SERPINA12Q8IW75 414 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 THAP3Q8WTV1 239 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 HSD17B8Q92506 261 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 GCDHQ92947 438 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 TMEM246Q9BRR3 403 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 SLC7A5P2Q9GIP4 190 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 BEX1Q9HBH7 125 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 GALNT9Q9HCQ5 603 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ING1Q9UK53 422 aaPredicted RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 PCDHGB7Q9Y5F8 929 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 NPIPB9F8W1W9 429 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 SCO2O43819 266 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF217O75362 1048 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 PPM1BO75688 479 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 OR7A10O76100 309 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 GPANK1O95872 356 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 HLA-DQA2P01906 255 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 ATF1P18846 271 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 TACR3P29371 465 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 IL12BP29460 328 aa10.55□□□□□ -0.72
PTPN2-201ENST00000309660 CDKN2AP42771 156 aaKnown RBP10.55□□□□□ -0.72
PTPN2-201ENST00000309660 FUT7Q11130 342 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms