RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 HEATR5BQ9P2D3 2071 aa4.49□□□□□ -1.69
CKS1B-201ENST00000308987 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SCN2AQ99250 2005 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 IGHV5-51A0A0C4DH38 117 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TRDV1A0A1B0GX56 115 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 A0A1W2PQ09 198 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 LILRA5A6NI73 299 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SYT5O00445 386 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 FFAR1O14842 300 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MYL12BO14950 172 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PDPK1O15530 556 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RGS5O15539 181 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ARHGEF9O43307 516 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 VEGFDO43915 354 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMCC2O75069 709 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 IL3P08700 152 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 HBQ1P09105 142 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ANKRD34CP0C6C1 535 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 NR2F6P10588 404 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ACP2P11117 423 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 FGF5P12034 268 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ACP5P13686 325 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 F3P13726 295 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PRF1P14222 555 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MYL12AP19105 171 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CD53P19397 219 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TCEA1P23193 301 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MYL9P24844 172 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ELAVL4P26378 380 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 GABRA5P31644 462 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SDC2P34741 201 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 IFNGR2P38484 337 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 NR4A2P43354 598 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CAPZA2P47755 286 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 OR1E2P47887 323 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SMSP52788 366 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CRISP3P54108 245 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 LIM2P55344 173 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 WNT4P56705 351 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 GNG2P59768 71 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TBPL1P62380 186 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MRPS15P82914 257 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CDK5Q00535 292 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 BDH1Q02338 343 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TAP2Q03519 686 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM115Q12893 351 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TAB1Q15750 504 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF79Q15937 498 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 DUSP7Q16829 419 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TBRG1Q3YBR2 411 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 GPAT3Q53EU6 434 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 YIF1BQ5BJH7 314 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF628Q5EBL2 1059 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PDZK1Q5T2W1 519 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CCNJQ5T5M9 372 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 FHL5Q5TD97 284 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 LCN1P1Q5VSP4 162 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 HACD4Q5VWC8 232 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 LCN10Q6JVE6 187 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PWWP2BQ6NUJ5 590 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 C1orf94Q6P1W5 598 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MZT2AQ6P582 158 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM220Q6QAJ8 160 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ANGPTL8Q6UXH0 198 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMIGD1Q6UXZ0 262 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM64Q6YI46 380 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF730Q6ZMV8 503 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 QSOX2Q6ZRP7 698 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 FAM83HQ6ZRV2 1179 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMPRSS11BQ86T26 416 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF547Q8IVP9 402 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SLC34A3Q8N130 599 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RNF175Q8N4F7 328 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TBC1D19Q8N5T2 526 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ESX1Q8N693 406 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RBMXL3Q8N7X1 1067 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SLC38A9Q8NBW4 561 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TOR1AIP2Q8NFQ8 470 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 GPR32P1Q8NGA4 272 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 OR4K1Q8NGD4 311 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 OR52I1Q8NGK6 324 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 OR10G6Q8NH81 332 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ANGPTL6Q8NI99 470 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 BBS10Q8TAM1 723 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TMEM163Q8TC26 289 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SFXN5Q8TD22 340 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 GPR151Q8TDV0 419 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CREB3L4Q8TEY5 395 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SLC38A5Q8WUX1 472 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ACOT12Q8WYK0 555 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RSC1A1Q92681 617 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RAD51AP1Q96B01 352 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MOAP1Q96BY2 351 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZBED6CLQ96FA7 236 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 AHCYL2Q96HN2 611 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RNF170Q96K19 258 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms