RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PRDM9Q9NQV7 894 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 LSM5Q9Y4Y9 91 aaKnown RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 OR8G3PP0DMU2 310 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 BMP1P13497 986 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SSR4P51571 173 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 C17orf67Q0P5P2 114 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 CAMK2DQ13557 499 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 GPR19Q15760 415 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 UBE2NLQ5JXB2 153 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 NKAIN2Q5VXU1 208 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 TSSK4Q6SA08 328 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 NDUFAF7Q7L592 441 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 AMBRA1Q9C0C7 1298 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 PRRT4C9JH25 899 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ZNF593O00488 134 aaPredicted RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 MRPL33O75394 65 aaKnown RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 SCG5P05408 212 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 FPR3P25089 353 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 MZT1Q08AG7 82 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 FGFBP1Q14512 234 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 GDF7Q7Z4P5 450 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 LILRB2Q8N423 598 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ARL5BQ96KC2 179 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 LYRM4Q9HD34 91 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 KLK4Q9Y5K2 254 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 WIF1Q9Y5W5 379 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 CTDSP2O14595 271 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 ACTL6BO94805 426 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TAS2R19P59542 299 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 ZNF750Q32MQ0 723 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 NHSL2Q5HYW2 709 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 CMIPQ8IY22 773 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 IL17RDQ8NFM7 739 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 OR1E3Q8WZA6 343 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TXNDC15Q96J42 360 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 ZDHHC5Q9C0B5 715 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 NDUFAF4Q9P032 175 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 DIMT1Q9UNQ2 313 aaKnown RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 LOC105369274A0A096LPK9 316 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 LRIT2A6NDA9 550 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 A6NIN4 97 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TMEM212A6NML5 194 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 GAPDHSO14556 408 aaPredicted RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 SERPINE2P07093 398 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 CAV2P51636 162 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 LIM2P55344 173 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 NOXA1Q86UR1 476 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 NLRP8Q86W28 1048 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 OR4N4Q8N0Y3 316 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 PRR18Q8N4B5 295 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 OR6T1Q8NGN1 323 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 PRELID1Q9Y255 219 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 MTFR2Q6P444 385 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 PAPD4Q6PIY7 484 aaKnown RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 FAM83FQ8NEG4 500 aaPredicted RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 TMEM255BQ8WV15 326 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 RPL3LQ92901 407 aaKnown RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 GCDHQ92947 438 aaPredicted RBP14.78□□□□□ -0.04
USP42-201ENST00000306177 MYEOVQ96EZ4 313 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 COQ10AQ96MF6 247 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 SLA2Q9H6Q3 261 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 DNAJB11Q9UBS4 358 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TMED7-TICAM2A0A0A6YYA0 188 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TMEM72A0PK05 275 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 MEIOCA2RUB1 952 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 B8ZZF3 427 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 PTHP01270 115 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 DBHP09172 617 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 GAAP10253 952 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 CXADRP78310 365 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 SIRPAP78324 504 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 FOXK2Q01167 660 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 GPR157Q5UAW9 335 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 FAM57BQ71RH2 274 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 MKXQ8IYA7 352 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 C1orf198Q9H425 327 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 NOX3Q9HBY0 568 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 TMED7Q9Y3B3 224 aa14.78□□□□□ -0.04
USP42-201ENST00000306177 OR5K3A6NET4 321 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 MT-ND4P03905 459 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 GIFP27352 417 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 PYCR3Q53H96 274 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 METAP1DQ6UB28 335 aaPredicted RBP14.77□□□□□ -0.04
USP42-201ENST00000306177 ZFPM2Q8WW38 1151 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 NIPSNAP1Q9BPW8 284 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 SPHK1Q9NYA1 384 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 H7C1C5 153 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 AP1G1O43747 822 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 DLSTP36957 453 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 LCN6P62502 163 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 SLC35A1P78382 337 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 RELAQ04206 551 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 DLEU7Q6UYE1 221 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 DPY19L2P2Q6ZN68 376 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 FCRLAQ7L513 359 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 SULT4A1Q9BR01 284 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 PPT2Q9UMR5 302 aa14.77□□□□□ -0.04
USP42-201ENST00000306177 B4DXG7 233 aa14.77□□□□□ -0.05
USP42-201ENST00000306177 SERPINA2P20848 420 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms