RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SSX9Q7RTT3 188 aa10.08□□□□□ -0.8
LSM3-201ENST00000306024 TGM7Q96PF1 710 aa10.08□□□□□ -0.8
LSM3-201ENST00000306024 KCNJ15Q99712 375 aa10.08□□□□□ -0.8
LSM3-201ENST00000306024 SLCO1C1Q9NYB5 712 aa10.08□□□□□ -0.8
LSM3-201ENST00000306024 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
LSM3-201ENST00000306024 UGDHO60701 494 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 ITGA10O75578 1167 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 KRT33AO76009 404 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SNAPINO95295 136 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 CELA2BP08218 269 aaPredicted RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 OR10A3P58181 314 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 STXBP1P61764 594 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 UBE2IP63279 158 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 TAF13Q15543 124 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 Q3ZCU0 254 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 KLHL26Q53HC5 615 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SLCO4C1Q6ZQN7 724 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FAM122BQ7Z309 247 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 OR2L8Q8NGY9 312 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 TCTEX1D2Q8WW35 142 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FCAMRQ8WWV6 532 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 F2RL3Q96RI0 385 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 BBS4Q96RK4 519 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FAIM2Q9BWQ8 316 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 KIR3DX1Q9H7L2 352 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 PI4KAP42356 2102 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 RTCAO00442 366 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 SC5DO75845 299 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SOX30O94993 753 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 CD2P06729 351 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SPP1P10451 314 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 PVRP15151 417 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 NOS3P29474 1203 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FIGLAQ6QHK4 219 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 TMEM91Q6ZNR0 172 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FAM26EQ8N5C1 309 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 ACBD7Q8N6N7 88 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 STOML3Q8TAV4 291 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SGK3Q96BR1 496 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 NRTNQ99748 197 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 NDC1Q9BTX1 674 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 LRRC61Q9BV99 259 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 PINK1Q9BXM7 581 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FBXW2Q9UKT8 454 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 NOSIPQ9Y314 301 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 YY2O15391 372 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 ZNF3P17036 446 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 NPR2P20594 1047 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 ATP5A1P25705 553 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 ELAVL4P26378 380 aaKnown RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 MTNR1BP49286 362 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 TMEM44Q2T9K0 475 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 FAM27D1Q5T7N8 215 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SLC30A6Q6NXT4 461 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 C5orf46Q6UWT4 87 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 Q6ZTK2 550 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 KRT77Q7Z794 578 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 LAS2Q8IYD9 372 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 OR6V1Q8N148 313 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 DTWD2Q8NBA8 298 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 SENP5Q96HI0 755 aaPredicted RBP10.07□□□□□ -0.8
LSM3-201ENST00000306024 RNF32Q9H0A6 362 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 REEP4Q9H6H4 257 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 EGLN3Q9H6Z9 239 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 UFSP2Q9NUQ7 469 aa10.07□□□□□ -0.8
LSM3-201ENST00000306024 A8MXK9 166 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 M0R3H8 397 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 AHRP35869 848 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 SKP1P63208 163 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 KIR2DS3Q14952 304 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 MINDY4Q4G0A6 757 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 ZNF546Q86UE3 836 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 COL26A1Q96A83 441 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 RGMAQ96B86 450 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 LRIT1Q9P2V4 623 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 RPH3AQ9Y2J0 694 aaPredicted RBP10.06□□□□□ -0.8
LSM3-201ENST00000306024 ABCD4O14678 606 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 OIP5O43482 229 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 MRPL3P09001 348 aaKnown RBP10.06□□□□□ -0.8
LSM3-201ENST00000306024 FGF2P09038 288 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 NR0B1P51843 470 aaKnown RBP10.06□□□□□ -0.8
LSM3-201ENST00000306024 TAS2R50P59544 299 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 PODNL1Q6PEZ8 512 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 CMIPQ8IY22 773 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 BEST3Q8N1M1 668 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 L3MBTL4Q8NA19 623 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 OR52L1Q8NGH7 329 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 PIGXQ8TBF5 258 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 EXOSC8Q96B26 276 aaKnown RBP10.06□□□□□ -0.8
LSM3-201ENST00000306024 TMEM19Q96HH6 336 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 MACROD1Q9BQ69 325 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 ARHGAP9Q9BRR9 750 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 GAREM1Q9H706 876 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 DDX31Q9H8H2 851 aaKnown RBP10.06□□□□□ -0.8
LSM3-201ENST00000306024 BABAM2Q9NXR7 383 aa10.06□□□□□ -0.8
LSM3-201ENST00000306024 A8MVJ9 347 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms