RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 WDR88Q6ZMY6 472 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 VTCN1Q7Z7D3 282 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 RBM15BQ8NDT2 890 aaKnown RBP11.88□□□□□ -0.51
VPS28-201ENST00000292510 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 PIGXQ8TBF5 258 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 TAAR8Q969N4 342 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 TAPBPLQ9BX59 468 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 PCDHAC1Q9H158 963 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 CRIM1Q9NZV1 1036 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 SEC14L4Q9UDX3 406 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 FOXD3Q9UJU5 478 aaPredicted RBP11.88□□□□□ -0.51
VPS28-201ENST00000292510 MPDZO75970 2070 aa11.88□□□□□ -0.51
VPS28-201ENST00000292510 TACC2O95359 2948 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 TRAPPC13A5PLN9 417 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 ZNF724A8MTY0 619 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 B2RBV5 119 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 FTCDNL1E5RQL4 147 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 EIF1BO60739 113 aaKnown RBP11.87□□□□□ -0.51
VPS28-201ENST00000292510 POU2F1P14859 743 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 CBLP22681 906 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 NTF4P34130 210 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 P2RY4P51582 365 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 FOXD4Q12950 439 aaPredicted RBP11.87□□□□□ -0.51
VPS28-201ENST00000292510 PIN1Q13526 163 aaPredicted RBP11.87□□□□□ -0.51
VPS28-201ENST00000292510 GLYATQ6IB77 296 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 PAQR6Q6TCH4 344 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 CBLL1Q75N03 491 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 MFSD8Q8NHS3 518 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 SLC41A3Q96GZ6 507 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 HSH2DQ96JZ2 352 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 NAA11Q9BSU3 229 aaPredicted RBP11.87□□□□□ -0.51
VPS28-201ENST00000292510 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 CD300AQ9UGN4 299 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 SLC7A7Q9UM01 511 aa11.87□□□□□ -0.51
VPS28-201ENST00000292510 APCP25054 2843 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 TRAV36DV7A0A075B6V5 113 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 TUBAL3A6NHL2 446 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 AQP7P3A6NL99 342 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 LRRN3E7EW58 273 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 CHP2O43745 196 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 HSD17B1P14061 328 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 FUT4P22083 530 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 CALB2P22676 271 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 CCKARP32238 428 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 CD79BP40259 229 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 KIR2DL3P43628 341 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 YAP1P46937 504 aaKnown RBP11.86□□□□□ -0.51
VPS28-201ENST00000292510 MNAT1P51948 309 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 SLC16A1P53985 500 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 SORDQ00796 357 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 LTBQ06643 244 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 PDK3Q15120 406 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 SAMD4BQ5PRF9 694 aaKnown RBP11.86□□□□□ -0.51
VPS28-201ENST00000292510 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
VPS28-201ENST00000292510 LINC00114Q6XXX2 140 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 TRPM8Q7Z2W7 1104 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 GDF7Q7Z4P5 450 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 GALNT5Q7Z7M9 940 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 GPAT4Q86UL3 456 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 KIF18BQ86Y91 864 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 KDM8Q8N371 416 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 LZICQ8WZA0 190 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 PRSS27Q9BQR3 290 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 TACO1Q9BSH4 297 aaKnown RBP11.86□□□□□ -0.51
VPS28-201ENST00000292510 KLHL4Q9C0H6 718 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 SNX13Q9Y5W8 968 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 MAST4O15021 2626 aa11.86□□□□□ -0.51
VPS28-201ENST00000292510 J3KTA2 159 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 M0R082 166 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
VPS28-201ENST00000292510 UBOX5O94941 541 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 BGLAPP02818 100 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 GTF2E2P29084 291 aaKnown RBP11.85□□□□□ -0.51
VPS28-201ENST00000292510 GRPRP30550 384 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 UGT2B10P36537 528 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 TAS2R41P59536 307 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 SLC17A1Q14916 467 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 FAM69AQ5T7M9 428 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 ANKRD34AQ69YU3 496 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 FKBP9P1Q75LS8 142 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 STK32CQ86UX6 486 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 NKAIN4Q8IVV8 208 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 OR9K2Q8NGE7 335 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 ZNF417Q8TAU3 575 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 ZNF587Q96SQ5 575 aaPredicted RBP11.85□□□□□ -0.51
VPS28-201ENST00000292510 TMEM43Q9BTV4 400 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 AMBRA1Q9C0C7 1298 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 ELOVL5Q9NYP7 299 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 EMC3Q9P0I2 261 aa11.85□□□□□ -0.51
VPS28-201ENST00000292510 C6orf203Q9P0P8 240 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms