RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CTHRC1Q96CG8 243 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 ACTR6Q9GZN1 396 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 PCED1AQ9H1Q7 454 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 I3L521 148 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GPR171O14626 319 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 PRKNO60260 465 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 SRPX2O60687 465 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 SC5DO75845 299 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GKN3PP0CG01 181 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 PRG2P13727 222 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CAPZA2P47755 286 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CAMK2DQ13557 499 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 GRK1Q15835 563 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 FAM27D1Q5T7N8 215 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 PRPF38BQ5VTL8 546 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 OGFOD3Q6PK18 319 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 BPHLQ86WA6 291 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 SIAH3Q8IW03 269 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 CMIPQ8IY22 773 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 OR52L1Q8NGH7 329 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 TBX5Q99593 518 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 C12orf10Q9HB07 376 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 FSCN3Q9NQT6 498 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 EMC3Q9P0I2 261 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 UBQLN2Q9UHD9 624 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 SCP2D1Q9UJQ7 156 aa16.81■□□□□ 0.28
PDLIM3-201ENST00000284767 RPS10-NUDT3A0A1W2PQS6 291 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 UNC119BA6NIH7 251 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 OR7A10O76100 309 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 H2AFB2P0C5Z0 115 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 ZGLP1P0C6A0 271 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 NNATQ16517 81 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 LGALSLQ3ZCW2 172 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 BAIAP2L2Q6UXY1 529 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 BTN2A1Q7KYR7 527 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC35F3Q8IY50 421 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 OR10H4Q8NGA5 316 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 DNASE2BQ8WZ79 361 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 NACC2Q96BF6 587 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 NXPE2Q96DL1 559 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 OR52D1Q9H346 318 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 MTHFD2LQ9H903 347 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 CLDN16Q9Y5I7 305 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 A0A087WV62 115 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 TLCD2A6NGC4 264 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 UBL4AP11441 157 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 DNASE1P24855 282 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 STX4Q12846 297 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 EXOSC2Q13868 293 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 FGFBP1Q14512 234 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC22A10Q63ZE4 541 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 COMMD7Q86VX2 200 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 LSMEM1Q8N8F7 131 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 FANK1Q8TC84 345 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 KISS1RQ969F8 398 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 ZNF350Q9GZX5 532 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 UCK1Q9HA47 277 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 PRDM9Q9NQV7 894 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC7A7Q9UM01 511 aa16.8■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC22A31A6NKX4 558 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC35E2P0CK97 266 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 RNH1P13489 461 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 S1PR1P21453 382 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 TBXA2RP21731 343 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 POU4F3Q15319 338 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC25A35Q3KQZ1 300 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 EXOSC6Q5RKV6 272 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC51BQ86UW2 128 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 CDRT4Q8N9R6 151 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 HAVCR2Q8TDQ0 301 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 CCDC120Q96HB5 630 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 DPCDQ9BVM2 203 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 PDE7BQ9NP56 450 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 DLL4Q9NR61 685 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 ABRACLQ9P1F3 81 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 PLCL2Q9UPR0 1127 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 TMEM5Q9Y2B1 443 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 LRRN3E7EW58 273 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 BHLHE40O14503 412 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 HYAL3O43820 417 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 CD3GP09693 182 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 GIMD1P0DJR0 217 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 RAB3BP20337 219 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 ZNF81P51508 661 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 TAGLNQ01995 201 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 ST3GAL2Q16842 350 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 OR56B4Q8NH76 319 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 GIMAP1Q8WWP7 306 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 LRRN3Q9H3W5 708 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 MED20Q9H944 212 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 CACYBPQ9HB71 228 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 KLHL1Q9NR64 748 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 NPTNQ9Y639 398 aa16.79■□□□□ 0.28
PDLIM3-201ENST00000284767 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
PDLIM3-201ENST00000284767 ZC3H12DA2A288 527 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-201ENST00000284767 E9PI62 339 aa16.78■□□□□ 0.28
PDLIM3-201ENST00000284767 SAGP10523 405 aaPredicted RBP16.78■□□□□ 0.28
PDLIM3-201ENST00000284767 SLC3A1Q07837 685 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms