RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CACNG2Q9Y698 323 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 XKRY2A2RUG3 117 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 H0YGG7 62 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 H3BSA7 217 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 K7ERQ8 282 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PTGESO14684 152 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MSTNO14793 375 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF749O43361 778 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 DPM1O60762 260 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CRYAAP02489 173 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CLEC3BP05452 202 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 POU2F2P09086 479 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 DBHP09172 617 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TNFRSF1AP19438 455 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GMPRP36959 345 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TGM4P49221 684 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NOVA1P51513 510 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MTCP1P56278 107 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PGGHGQ32M88 737 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PAGE3Q5JUK9 113 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 HBMQ6B0K9 141 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PRR18Q8N4B5 295 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GJC3Q8NFK1 279 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR2T27Q8NH04 317 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR5W2Q8NH69 310 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZMYND19Q96E35 227 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 BSCL2Q96G97 398 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MED18Q9BUE0 208 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PCED1AQ9H1Q7 454 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CDCP1Q9H5V8 836 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF576Q9H609 170 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR52A1Q9UKL2 312 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ETV7Q9Y603 341 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FMN2Q9NZ56 1722 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 J3QRK9 145 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GOSR2O14653 212 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ARPC5O15511 151 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 EIF4E2O60573 245 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 METTL15P1P0C7V9 234 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CHRNB1P11230 501 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PTNP21246 168 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CSNK1EP49674 416 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CARD18P57730 90 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TNFRSF17Q02223 184 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 C4orf17Q53FE4 359 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 UBE2NLQ5JXB2 153 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 C6orf15Q6UXA7 325 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MEX3BQ6ZN04 569 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SVBPQ8N300 66 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SIMC1Q8NDZ2 872 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PLPP5Q8NEB5 264 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR51A2Q8NGJ7 313 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GOT1L1Q8NHS2 421 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 COQ10AQ96MF6 247 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 RNF38Q9H0F5 515 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 C1orf198Q9H425 327 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF696Q9H7X3 374 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PRDM9Q9NQV7 894 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 EHFQ9NZC4 300 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 KCNG2Q9UJ96 466 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GABRQQ9UN88 632 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PROCRQ9UNN8 238 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 HCFC2Q9Y5Z7 792 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 VIRMAQ69YN4 1812 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 KDM4FA0A1W2PPD8 638 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GALR2O43603 387 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MAP2K6P52564 334 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SEMA3BQ13214 749 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 HES5Q5TA89 166 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CCBE1Q6UXH8 406 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SSX8Q7RTT4 187 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 CAMKMTQ7Z624 323 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 KMT5CQ86Y97 462 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM25Q86YD3 366 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 APCDD1Q8J025 514 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TEX29Q8N6K0 151 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 OR5T1Q8NG75 326 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ITFG2Q969R8 447 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NT5C3BQ969T7 300 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 LCORQ96JN0 433 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SLC35E1Q96K37 410 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 NSUN5Q96P11 429 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM246Q9BRR3 403 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PLCXD1Q9NUJ7 323 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 DNMT3BQ9UBC3 853 aaKnown RBP3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF281Q9Y2X9 895 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 ARNTLO00327 626 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 PRAMEF4O60810 478 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 FBP1P09467 338 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 MYF6P23409 242 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 SELENOWP63302 87 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 GPR18Q14330 331 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 LAPTM4AQ15012 233 aa3.79□□□□□ -1.8
SCN3A-201ENST00000283254 TBCEQ15813 527 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms