RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR5H15A6NDH6 313 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3FA6NER0 549 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR5H1A6NKK0 313 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3LB9A6J9 549 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 RPL36A-HNRNPH2H7BZ11 118 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 PRAMEF12O95522 483 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TXNDC12O95881 172 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ATP1B1P05026 303 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 CD5P06127 495 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 MMP3P08254 477 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 S1PR1P21453 382 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF84P51523 738 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 KCNMB1Q16558 191 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 DCAF10Q5QP82 559 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 LY6G6FQ5SQ64 297 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OLFML2AQ68BL7 652 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3CQ6IPX1 549 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ACOT7LQ6ZUV0 252 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3Q8IZP1 549 aaPredicted RBP8.51□□□□□ -1.05
PDGFC-201ENST00000274071 BEST3Q8N1M1 668 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 HIST3H2BBQ8N257 126 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR5AP2Q8NGF4 316 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 SPPL3Q8TCT6 385 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 NEK7Q8TDX7 302 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ECHDC3Q96DC8 303 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 OR52A5Q9H2C5 316 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 CD84Q9UIB8 345 aa8.51□□□□□ -1.05
PDGFC-201ENST00000274071 ANKRD20A5PA0PJZ0 165 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 C1orf226A1L170 272 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CPED1A4D0V7 1026 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 B4E171 279 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 GABARAPH6UMI1 98 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ITGB1BP1O14713 200 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 TAPBPO15533 448 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 PDYNP01213 254 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 BCHEP06276 602 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 GUSBP08236 651 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 FABP4P15090 132 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 HNF1AP20823 631 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ATXN7L3Q14CW9 347 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 OR7A5Q15622 319 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CPSF6Q16630 551 aaKnown RBP eCLIP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 COX20Q5RI15 118 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 C9orf64Q5T6V5 341 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 SYT9Q86SS6 491 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 PNLDC1Q8NA58 520 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 Q8NFD4 153 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 NPRL2Q8WTW4 380 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 MYEOVQ96EZ4 313 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 APIPQ96GX9 242 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 MRGPRX4Q96LA9 322 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 SLITRK2Q9H156 845 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 SLC25A51Q9H1U9 297 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ELOVL2Q9NXB9 296 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 TRBC2A0A5B9 178 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 A6NNC1 897 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 MFNGO00587 321 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CIDEAO60543 219 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 REM1O75628 298 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 IL18BPO95998 194 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 FGBP02675 491 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ASGR2P07307 311 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 EPB42P16452 691 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 TYRP1P17643 537 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 NME2P22392 152 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ELAVL4P26378 380 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CD80P33681 288 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 DGKGP49619 791 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 GATMP50440 423 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 SLC10A1Q14973 349 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 LRRC37A5PQ49AS3 106 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 C14orf28Q4W4Y0 310 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 DCST1Q5T197 706 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 C11orf87Q6NUJ2 197 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF322Q6U7Q0 402 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CEACAM19Q7Z692 300 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CMTM4Q8IZR5 234 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 NAXEQ8NCW5 288 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 OR52N2Q8NGI0 321 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 OR2L8Q8NGY9 312 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 PIGXQ8TBF5 258 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CD200R1Q8TD46 325 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 CMTM7Q96FZ5 175 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 IMP4Q96G21 291 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 HSPA12BQ96MM6 686 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 SULT4A1Q9BR01 284 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 C20orf24Q9BUV8 137 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 FAM124BQ9H5Z6 455 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 KRCC1Q9NPI7 259 aaPredicted RBP8.5□□□□□ -1.05
PDGFC-201ENST00000274071 DDIT4Q9NX09 232 aa8.5□□□□□ -1.05
PDGFC-201ENST00000274071 PPIL1Q9Y3C6 166 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms