RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SERINC4A6NH21 518 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 GAPDHSO14556 408 aaPredicted RBP10.65□□□□□ -0.71
USP53-201ENST00000274030 TAPBPO15533 448 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 KCNK5O95279 499 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 MSR1P21757 451 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 MMP12P39900 470 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 OPRD1P41143 372 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 CMPK2Q5EBM0 449 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 LANCL3Q6ZV70 420 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 OR13H1Q8NG92 308 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 OR14K1Q8NGZ2 314 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 GHSRQ92847 366 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 SLC41A2Q96JW4 573 aa10.65□□□□□ -0.71
USP53-201ENST00000274030 CMSS1Q9BQ75 279 aaKnown RBP10.65□□□□□ -0.71
USP53-201ENST00000274030 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 IGHV3-20A0A0C4DH32 117 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 CEBPZOSA8MTT3 80 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 TNFSF4P23510 183 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 SHC1P29353 583 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 SLC5A2P31639 672 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 MTCP1P56278 107 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 SEMA3BQ13214 749 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 CRMP1Q14194 572 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 DNAJC22Q8N4W6 341 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 PSMF1Q92530 271 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 TM4SF18Q96CE8 201 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 MS4A8Q9BY19 250 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 EMC3Q9P0I2 261 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 FZD7O75084 574 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 IFNA17P01571 189 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 FAM69AQ5T7M9 428 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 AAED1Q7RTV5 226 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 LAX1Q8IWV1 398 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 ZNF511Q8NB15 262 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 PCNPQ8WW12 178 aaKnown RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 PDXPQ96GD0 296 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 NIPSNAP1Q9BPW8 284 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 FKRPQ9H9S5 495 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 ZMAT3Q9HA38 289 aaKnown RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 SLAMF7Q9NQ25 335 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 BOKQ9UMX3 212 aaPredicted RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 H0Y8X5 98 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 CD46P15529 392 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 PAPD4Q6PIY7 484 aaKnown RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 LRRC28Q86X40 367 aaPredicted RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 GLB1L2Q8IW92 636 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 KDM8Q8N371 416 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 MICU1Q9BPX6 476 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 HRH4Q9H3N8 390 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 GNB3P16520 340 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 BIDP55957 195 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 YPEL5P62699 121 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 TAZQ16635 292 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 DCAF12Q5T6F0 453 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 BORAQ6PGQ7 559 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 UBE2FQ969M7 185 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 TMEM106AQ96A25 262 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 SORCS2Q96PQ0 1159 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 VRK1Q99986 396 aaPredicted RBP10.64□□□□□ -0.71
USP53-201ENST00000274030 ZFP57Q9NU63 452 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 NENFQ9UMX5 172 aa10.64□□□□□ -0.71
USP53-201ENST00000274030 A0A1B0GWA3 101 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 BLACEA4D250 179 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 HCRTR1O43613 425 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 CACNG3O60359 315 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 UTS2O95399 124 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 OMGP23515 440 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 BCL6P41182 706 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SLC1A3P43003 542 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 DCDP81605 110 aaKnown RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF767PQ75MW2 155 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 SLC16A11Q8NCK7 471 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 STEAP2Q8NFT2 490 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 OR5L1Q8NGL2 311 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 OR14A16Q8NHC5 309 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SEC22AQ96IW7 307 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 AMDHD1Q96NU7 426 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 CENPOQ9BU64 300 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZBP1Q9H171 429 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ZNF576Q9H609 170 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 CHD4Q14839 1912 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PRAMEF27A3QJZ7 478 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SURF4O15260 269 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 PRAMEF9Q5VWM5 478 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 RPL22L1Q6P5R6 122 aaKnown RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 RABEPKQ7Z6M1 372 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 RTN4RL1Q86UN2 441 aaPredicted RBP10.63□□□□□ -0.71
USP53-201ENST00000274030 OR4M1Q8NGD0 313 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 OR6T1Q8NGN1 323 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 SPPL3Q8TCT6 385 aa10.63□□□□□ -0.71
USP53-201ENST00000274030 ARSGQ96EG1 525 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms