RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 S100A9P06702 114 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 ENPP1P22413 925 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 NOVA1P51513 510 aaKnown RBP12.67□□□□□ -0.38
NPC1-201ENST00000269228 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 BCORP1Q8N888 145 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 FER1L6Q2WGJ9 1857 aa12.67□□□□□ -0.38
NPC1-201ENST00000269228 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 TSPAN4O14817 238 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 OR8G3PP0DMU2 310 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CRMP1Q14194 572 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 HBMQ6B0K9 141 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 PRICKLE2Q7Z3G6 844 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 NDNFQ8TB73 568 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPC1-201ENST00000269228 CORINQ9Y5Q5 1042 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CABIN1Q9Y6J0 2220 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CHP2O43745 196 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 FCMRO60667 390 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 MOSPD3O75425 235 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 TPOP07202 933 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 NID1P14543 1247 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 YBX1P67809 324 aaKnown RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 ARHGAP11BQ3KRB8 267 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 GALNT11Q8NCW6 608 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 OR51T1Q8NGJ9 327 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 C16orf52Q8NHV5 167 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CHST8Q9H2A9 424 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 SEMA4GQ9NTN9 838 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 EIF4E2O60573 245 aaKnown RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 KCNK2O95069 426 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 ZGLP1P0C6A0 271 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 SRSF5Q13243 272 aaKnown RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 ILKQ13418 452 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 MUCL1Q96DR8 90 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 CSF3RQ99062 836 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 OR10A4Q9H209 315 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 ARFGEF1Q9Y6D6 1849 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 HTR5AP47898 357 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 EIF5AP63241 154 aaKnown RBP12.66□□□□□ -0.38
NPC1-201ENST00000269228 COL28A1Q2UY09 1125 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 POGLUT1Q8NBL1 392 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 INPP5EQ9NRR6 644 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 KCNIP1Q9NZI2 227 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
NPC1-201ENST00000269228 NOTOA8MTQ0 251 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 MEN1O00255 615 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 SCGNO76038 276 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 DIRAS3O95661 229 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 PPICP45877 212 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 SLC26A5P58743 744 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 FOXK2Q01167 660 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 MAB21L1Q13394 359 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 GPR50Q13585 617 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 BPHLQ86WA6 291 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 KDM8Q8N371 416 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 OR2I1PQ8NGU4 316 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 SYT4Q9H2B2 425 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 OTOL1A6NHN0 477 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 EIF1BO60739 113 aaKnown RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 UGT2B10P36537 528 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 PSPHP78330 225 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 ZNF419Q96HQ0 510 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 SMOC1Q9H4F8 434 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 PLSCR5A0PG75 271 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 LGI1O95970 557 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 HOXB9P17482 250 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 TRIM23P36406 574 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 GLYR1Q49A26 553 aaPredicted RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 ENY2Q9NPA8 101 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 MED17Q9NVC6 651 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 UPK1AO00322 258 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
NPC1-201ENST00000269228 P2RX1P51575 399 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 GPNMBQ14956 572 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 MLC1Q15049 377 aa12.65□□□□□ -0.38
NPC1-201ENST00000269228 FAM69AQ5T7M9 428 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms