RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ERMAPQ96PL5 475 aaPredicted RBP14.82□□□□□ -0.04
TPM1-201ENST00000267996 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 HPF1Q9NWY4 346 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 TAS2R16Q9NYV7 291 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 IER3IP1Q9Y5U9 82 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 CPAMD8Q8IZJ3 1885 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 PTPRBP23467 1997 aa14.82□□□□□ -0.04
TPM1-201ENST00000267996 DOCK10Q96BY6 2186 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FAM183AA6NL82 134 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 M0R082 166 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 ZNF208O43345 1280 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 IFNGP01579 166 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 PSMB9P28065 219 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 AQP2P41181 271 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FOXF1Q12946 379 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 TMED1Q13445 227 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 CRMP1Q14194 572 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 INPP5JQ15735 1006 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 GXYLT1Q4G148 440 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 ACER2Q5QJU3 275 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FAM69AQ5T7M9 428 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 SLC22A10Q63ZE4 541 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 B3GNTL1Q67FW5 361 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 ASCL5Q7RTU5 278 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 ZNF367Q7RTV3 350 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 ANKRD13BQ86YJ7 626 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 POC1BQ8TC44 478 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 C12orf43Q96C57 262 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 DDOQ99489 341 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FUNDC2Q9BWH2 189 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 YIPF3Q9GZM5 350 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 NAA50Q9GZZ1 169 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 H2AFY2Q9P0M6 372 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 KLHL21Q9UJP4 597 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FBXL2Q9UKC9 423 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 EXOGQ9Y2C4 368 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 SLC6A5Q9Y345 797 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 EML6Q6ZMW3 1958 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 PRR23D1E9PI22 279 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 M0R3G1 203 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 IMPA2O14732 288 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 RAB36O95755 333 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 CD14P08571 375 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 PRR23D2P0DMB1 279 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 ZNF3P17036 446 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 SLC2A5P22732 501 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 RPL4P36578 427 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 ZNF41P51814 821 aaPredicted RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 PRAMEF20Q5VT98 475 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 B3GNT6Q6ZMB0 384 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 MEPCEQ7L2J0 689 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 TMPRSS7Q7RTY8 843 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FAM122BQ7Z309 247 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 IGFN1Q86VF2 1251 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 PLCZ1Q86YW0 608 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 GPALPP1Q8IXQ4 340 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 IL22RA1Q8N6P7 574 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 SIRT6Q8N6T7 355 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 SLC37A3Q8NCC5 494 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 C1GALT1C1Q96EU7 318 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 COG8Q96MW5 612 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 HCAR1Q9BXC0 346 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 PTTG2Q9NZH5 202 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 WARS2Q9UGM6 360 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 VDAC3Q9Y277 283 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 LSM2Q9Y333 95 aaKnown RBP14.81□□□□□ -0.04
TPM1-201ENST00000267996 ADAM18Q9Y3Q7 739 aa14.81□□□□□ -0.04
TPM1-201ENST00000267996 FAM186AA6NE01 2351 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 CCDC182A6NF36 153 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 FTCDNL1E5RQL4 147 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 H3BMQ9 156 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 BLOC1S5-TXNDC5H3BN57 136 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 SNPHO15079 494 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 OR2T1O43869 369 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 FZD7O75084 574 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 TXNDC12O95881 172 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 HIST1H2ABP04908 130 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 HIST1H1CP16403 213 aaKnown RBP14.8□□□□□ -0.04
TPM1-201ENST00000267996 NOS3P29474 1203 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 GSTT1P30711 240 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 RPL18Q07020 188 aaKnown RBP14.8□□□□□ -0.04
TPM1-201ENST00000267996 TIGD6Q17RP2 521 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 ALG10Q5BKT4 473 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 SLC16A12Q6ZSM3 486 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 HIST3H2AQ7L7L0 130 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 MAMDC2Q7Z304 686 aaPredicted RBP14.8□□□□□ -0.04
TPM1-201ENST00000267996 NANOGNBQ7Z5D8 188 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 GALNT15Q8N3T1 639 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 NANOGP1Q8N7R0 232 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 PROKR2Q8NFJ6 384 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 OR4K17Q8NGC6 315 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 RAB2BQ8WUD1 216 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 HIST1H2ACQ93077 130 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 KISS1RQ969F8 398 aaPredicted RBP14.8□□□□□ -0.04
TPM1-201ENST00000267996 KATNB1Q9BVA0 655 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 OR11A1Q9GZK7 315 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 MED20Q9H944 212 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 CLEC2DQ9UHP7 191 aa14.8□□□□□ -0.04
TPM1-201ENST00000267996 ENPP5Q9UJA9 477 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms