RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 ZNF684Q5T5D7 378 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 RPS27LQ71UM5 84 aaKnown RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 COMMD6Q7Z4G1 85 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 SLC25A18Q9H1K4 315 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 XRCC3O43542 346 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 PEX10O60683 326 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TIMP2P16035 220 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 HOXA11P31270 313 aaPredicted RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 NNATQ16517 81 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF239Q16600 458 aaKnown RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 NADSYN1Q6IA69 706 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 LARP4Q71RC2 724 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ANKRD53Q8N9V6 530 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM239Q8WW34 195 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 CDS1Q92903 461 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 NMNAT1Q9HAN9 279 aaPredicted RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 DOCK9Q9BZ29 2069 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 METTL15A6NJ78 407 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 SULT1C4O75897 302 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 OTX2P32243 289 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 CLEC4DQ8WXI8 215 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 OR6C68A6NDL8 312 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TCAPO15273 167 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 F10P00742 488 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 DEFA4P12838 97 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 HCCSP53701 268 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 CDK5Q00535 292 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ACSM1Q08AH1 577 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 DOC2AQ14183 400 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 P2RY14Q15391 338 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 PDZD11Q5EBL8 140 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 WBP2NLQ6ICG8 309 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF322Q6U7Q0 402 aaPredicted RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 CLEC1AQ8NC01 280 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 SCARB1Q8WTV0 552 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 C1orf198Q9H425 327 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 FBRSL1Q9HCM7 1045 aaKnown RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 SULT2B1O00204 365 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TESK1Q15569 626 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 AADACL3Q5VUY0 350 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
SRRM4-201ENST00000267260 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 EPHA4P54764 986 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 FAM182AQ5T1J6 154 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 ADIPOR2Q86V24 386 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 EGLN3Q9H6Z9 239 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TAF9BQ9HBM6 251 aa11.33□□□□□ -0.6
SRRM4-201ENST00000267260 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 A0A0U1RQF3 1178 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 LIPCP11150 499 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 GLB1P16278 677 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 CPOQ8IVL8 374 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 DCLRE1CQ96SD1 692 aaKnown RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SFXN1Q9H9B4 322 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 WNT7AO00755 349 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SNNO75324 88 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 S1PR4O95977 384 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SLC35E2BP0CK96 405 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TBPP20226 339 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TRA2BP62995 288 aaKnown RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 C18orf63Q68DL7 685 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SYT13Q7L8C5 426 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 EID2Q8N6I1 236 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SLC41A2Q96JW4 573 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 F3P13726 295 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 ETV4P43268 484 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SLC7A9P82251 487 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 RBPJQ06330 500 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SPCS2Q15005 226 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 LTB4RQ15722 352 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 NOL4LQ96MY1 436 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 B4GALT6Q9UBX8 382 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 ZFP92A6NM28 416 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 CLDN1O95832 211 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 DBHP09172 617 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 ACP2P11117 423 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SFTPDP35247 375 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SPINT3P49223 89 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 GPR18Q14330 331 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TP53I3Q53FA7 332 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 LRRC56Q8IYG6 542 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 OR9Q2Q8NGE9 314 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms