RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TMEM31Q5JXX7 168 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 AVPI1Q5T686 147 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 CLEC14AQ86T13 490 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 FJX1Q86VR8 437 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 FRMD1Q8N878 549 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SLC19A3Q9BZV2 496 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 CPNE7Q9UBL6 633 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 NUDT1P36639 197 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 ASB11Q8WXH4 323 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SLC41A2Q96JW4 573 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 MBOAT4Q96T53 435 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 HRO43593 1189 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 TIMP2P16035 220 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ELAVL4P26378 380 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 UBE2NP61088 152 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 STK11Q15831 433 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 MMP21Q8N119 569 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 DDOQ99489 341 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 OPA3Q9H6K4 179 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 CXorf36Q9H7Y0 433 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 NIPAL2Q9H841 368 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 LUZP4Q9P127 313 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 CORINQ9Y5Q5 1042 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 A8MXE2 369 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 MPPED1O15442 326 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 FCGR2AP12318 317 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ZNF44P15621 663 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 RUNX3Q13761 415 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 HBMQ6B0K9 141 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 FAM111BQ6SJ93 734 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 C17orf107Q6ZR85 190 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 LIX1LQ8IVB5 337 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SLC35F3Q8IY50 421 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 CHCHD4Q8N4Q1 142 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 PFN4Q8NHR9 129 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SORCS2Q96PQ0 1159 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 HHLA2Q9UM44 414 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 A0A1W2PPV4 95 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SULT2B1O00204 365 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ACTL6BO94805 426 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 GABARAPO95166 117 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SPNP16150 400 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 GPLD1P80108 840 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 RPE65Q16518 533 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SLC36A2Q495M3 483 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 TMUB2Q71RG4 321 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 C14orf79Q96F83 325 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SLC22A23A1A5C7 686 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 OR6C76A6NM76 312 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 EIF2DP41214 584 aaKnown RBP11.21□□□□□ -0.61
SMG6-201ENST00000263073 SLC6A11P48066 632 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 OTPQ5XKR4 325 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 ZNF852Q6ZMS4 543 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 CBLCQ9ULV8 474 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 A0A0B4J203 849 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 H3BNC9 293 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 P2RY10O00398 339 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 TAPBPO15533 448 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 TMEM11P17152 192 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 SERPINF1P36955 418 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 SLC14A2Q15849 920 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 CCSMST1Q4G0I0 132 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 TMEM207Q6UWW9 146 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 IL22RA1Q8N6P7 574 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 TERB2Q8NHR7 220 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 APOOQ9BUR5 198 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 TMPRSS11EQ9UL52 423 aa11.21□□□□□ -0.61
SMG6-201ENST00000263073 M0QZQ0 153 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZNF865P0CJ78 1059 aaPredicted RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 ETV1P50549 477 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TPMTP51580 245 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 P2RX3P56373 397 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TSPAN31Q12999 210 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 IRF4Q15306 451 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TRIM61Q5EBN2 209 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 PELI3Q8N2H9 469 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 HSD17B11Q8NBQ5 300 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 TMEM106AQ96A25 262 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 UBXN10Q96LJ8 280 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 NRIP3Q9NQ35 241 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 NPAP1Q9NZP6 1156 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 MAGEB4O15481 346 aaPredicted RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 HIST1H1TP22492 207 aaPredicted RBP11.21□□□□□ -0.62
SMG6-201ENST00000263073 NPY4RP50391 375 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 CRMP1Q14194 572 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 LPAL2Q16609 132 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 OR10K2Q6IF99 312 aa11.21□□□□□ -0.62
SMG6-201ENST00000263073 Q6ZSR6 202 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms