RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FOXK2Q01167 660 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 C3P1Q6ZMU1 363 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 ZNF687Q8N1G0 1237 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 DPYSL5Q9BPU6 564 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 METTL17Q9H7H0 456 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-201ENST00000261963 CMC2Q9NRP2 79 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 MED9Q9NWA0 146 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 FLRT3Q9NZU0 649 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 SPATA2Q9UM82 520 aa20.77■□□□□ 0.92
MCF2L-201ENST00000261963 G3V3Q6 166 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 NUPL2O15504 423 aaKnown RBP20.76■□□□□ 0.91
MCF2L-201ENST00000261963 RGS9O75916 674 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-201ENST00000261963 PROS1P07225 676 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 PAICSP22234 425 aaKnown RBP20.76■□□□□ 0.91
MCF2L-201ENST00000261963 RABIFP47224 123 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 CCR6P51684 374 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 EPHA4P54764 986 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 RAB38P57729 211 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 ZP1P60852 638 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 DEFB110Q30KQ9 67 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 SIAH3Q8IW03 269 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 GRHL3Q8TE85 626 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 HMGB4Q8WW32 186 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 PMM1Q92871 262 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 SFXN2Q96NB2 322 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 TBX5Q99593 518 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 ALG8Q9BVK2 526 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 CAPN10Q9HC96 672 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 SLC22A23A1A5C7 686 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 RCBTB2O95199 551 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 DRD5P21918 477 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 F8A1P23610 371 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 BDH1Q02338 343 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 RGS7BPQ6MZT1 257 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-201ENST00000261963 BTN2A1Q7KYR7 527 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 ARHGEF39Q8N4T4 335 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 OR9A4Q8NGU2 314 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 ART5Q96L15 291 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 IFT27Q9BW83 186 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 GSDMCQ9BYG8 508 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 POLE3Q9NRF9 147 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 BABAM2Q9NXR7 383 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 MED31Q9Y3C7 131 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 COL4A2P08572 1712 aa20.76■□□□□ 0.91
MCF2L-201ENST00000261963 TRAV27A0A087WT01 109 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 A0A0B4J2E0 115 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 KIR2DS5A0A0G2JLQ3 304 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 A0A0G2JNG1 304 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 A0A1B0GX12 115 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 KIR2DS3K7RE56 304 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 RNF13O43567 381 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 PTP4A3O75365 173 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 SLC35E2P0CK97 266 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 IL9P15248 144 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ST6GAL1P15907 406 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 S1PR1P21453 382 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 SELENOPP49908 381 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 BLVRAP53004 296 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 SRSF5Q13243 272 aaKnown RBP20.75■□□□□ 0.91
MCF2L-201ENST00000261963 KIR2DS5Q14953 304 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ZSWIM7Q19AV6 140 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF613Q6PF04 617 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 CCDC3Q9BQI4 270 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ACTR6Q9GZN1 396 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 SLC6A15Q9H2J7 730 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 BRD7Q9NPI1 651 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 SAGP10523 405 aaPredicted RBP20.75■□□□□ 0.91
MCF2L-201ENST00000261963 TYRP1P17643 537 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 EMDP50402 254 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 PSG6Q00889 435 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 FCRLBQ6BAA4 426 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF559Q9BR84 538 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 CD207Q9UJ71 328 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 RASD1Q9Y272 281 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF175Q9Y473 711 aa20.75■□□□□ 0.91
MCF2L-201ENST00000261963 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-201ENST00000261963 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-201ENST00000261963 REM1O75628 298 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 IGKV1D-16P01601 117 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 CD3GP09693 182 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 NOS3P29474 1203 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 RPL13AP3Q6NVV1 102 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 OR51A7Q8NH64 312 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 OR56B4Q8NH76 319 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 CXorf58Q96LI9 332 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 TMEM27Q9HBJ8 222 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 C14orf105Q9NVL8 296 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 A0A1B0GWA3 101 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 A8MXK9 166 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 PRAMEF26H0Y7S4 382 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 THBS2P35442 1172 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 FAM198BQ6UWH4 519 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 TAF8Q7Z7C8 310 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 CDK20Q8IZL9 346 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 OR4N2Q8NGD1 307 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 PTCHD1Q96NR3 888 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF416Q9BWM5 594 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 USP36Q9P275 1121 aaKnown RBP20.74■□□□□ 0.91
MCF2L-201ENST00000261963 PFDN2Q9UHV9 154 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 FBXL21Q9UKT6 434 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms