RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.74
PFDN1-201ENST00000261813 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
PFDN1-201ENST00000261813 SVILO95425 2214 aa10.4□□□□□ -0.74
PFDN1-201ENST00000261813 CPSF4LA6NMK7 179 aaKnown RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CCL21O00585 134 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 FFAR1O14842 300 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SEC14L5O43304 696 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CHP2O43745 196 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 WDR1O75083 606 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 DIRAS1O95057 198 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CCNB2O95067 398 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 OPN1LWP04000 364 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CDH2P19022 906 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ACVR2AP27037 513 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PEX2P28328 305 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SHC1P29353 583 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ALDH3A2P51648 485 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 MAP2K6P52564 334 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 RAC1P63000 192 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 NPTX1Q15818 432 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 LPCAT4Q643R3 524 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PM20D2Q8IYS1 436 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 UBQLNLQ8IYU4 475 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CDK20Q8IZL9 346 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 MARVELD2Q8N4S9 558 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SMPDL3BQ92485 455 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SLC41A3Q96GZ6 507 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 DMRTA2Q96SC8 542 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 TUBA1CQ9BQE3 449 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM185BQ9H7F4 350 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 COQ10BQ9H8M1 238 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CTPS2Q9NRF8 586 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ALKBH4Q9NXW9 302 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 USE1Q9NZ43 259 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SLC5A6Q9Y289 635 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 MEMO1Q9Y316 297 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 U3KQV3 271 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 HEATR5AQ86XA9 2040 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 A0A0B4J2E0 115 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 A0A1B0GUH1 482 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 A0A1B0GX12 115 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SAC3D1A6NKF1 404 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 AHRRA9YTQ3 701 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 E9PLN8 166 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 J3KTA2 159 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 TPST2O60704 377 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 AGFG2O95081 481 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 GABRA1P14867 456 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 FKBP2P26885 142 aaKnown RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 HTR2AP28223 471 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SLC1A3P43003 542 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 LIMS1P48059 325 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 RAD23AP54725 363 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 MERTKQ12866 999 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SELENBP1Q13228 472 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 DAG1Q14118 895 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 LRRC36Q1X8D7 754 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CTU2Q2VPK5 515 aaKnown RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ALG10BQ5I7T1 473 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 FGD3Q5JSP0 725 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 C1orf185Q5T7R7 199 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 POMZP3Q6PJE2 187 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PLXDC2Q6UX71 529 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SEM1Q6ZVN7 128 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 GDF7Q7Z4P5 450 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CADM2Q8N3J6 435 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CBR4Q8N4T8 237 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 OR4C15Q8NGM1 316 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 OR52J3Q8NH60 311 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ZPLD1Q8TCW7 415 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 NRG4Q8WWG1 115 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ACOT11Q8WXI4 607 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 CCDC120Q96HB5 630 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 ADGRG7Q96K78 797 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 VKORC1Q9BQB6 163 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 SLC19A3Q9BZV2 496 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PDP1Q9P0J1 537 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 KIF17Q9P2E2 1029 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PLEKHB1Q9UF11 243 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-201ENST00000261813 MGAT4BQ9UQ53 548 aa10.39□□□□□ -0.75
PFDN1-201ENST00000261813 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 MYO9AB2RTY4 2548 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 NOTCH2Q04721 2471 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 DNAJC13O75165 2243 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 MED12Q93074 2177 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 A0A0J9YW62 118 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 A0A1B0GWA3 101 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 SH3PXD2BA1X283 911 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ENO4A6NNW6 628 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 EIF1AYO14602 144 aaKnown RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 RNF224P0DH78 156 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF26P17031 533 aaPredicted RBP10.38□□□□□ -0.75
PFDN1-201ENST00000261813 GSTM3P21266 225 aa10.38□□□□□ -0.75
PFDN1-201ENST00000261813 SFTPDP35247 375 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms